RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ABCC10Q5T3U5 1492 aa8.82□□□□□ -1
APOB-201ENST00000233242 PPP2R5CQ13362 524 aa8.82□□□□□ -1
APOB-201ENST00000233242 TAF1BQ53T94 588 aaPredicted RBP8.82□□□□□ -1
APOB-201ENST00000233242 KAZNQ674X7 775 aa8.82□□□□□ -1
APOB-201ENST00000233242 DNAJC24Q6P3W2 148 aa8.82□□□□□ -1
APOB-201ENST00000233242 DHX38Q92620 1227 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 STK36Q9NRP7 1315 aa8.82□□□□□ -1
APOB-201ENST00000233242 MED7O43513 233 aa8.82□□□□□ -1
APOB-201ENST00000233242 SYF2O95926 243 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 TMED10P49755 219 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 SYDE1Q6ZW31 735 aaPredicted RBP8.82□□□□□ -1
APOB-201ENST00000233242 ATG3Q9NT62 314 aa8.82□□□□□ -1
APOB-201ENST00000233242 MRPL11Q9Y3B7 192 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 ATP10DQ9P241 1426 aa8.82□□□□□ -1
APOB-201ENST00000233242 HPCAL4Q9UM19 191 aa8.82□□□□□ -1
APOB-201ENST00000233242 SNX5Q9Y5X3 404 aa8.82□□□□□ -1
APOB-201ENST00000233242 BBS9Q3SYG4 887 aa8.82□□□□□ -1
APOB-201ENST00000233242 ASPRV1Q53RT3 343 aa8.82□□□□□ -1
APOB-201ENST00000233242 WDR24Q96S15 920 aa8.82□□□□□ -1
APOB-201ENST00000233242 CYTH2Q99418 400 aa8.82□□□□□ -1
APOB-201ENST00000233242 CDCA7Q9BWT1 371 aaPredicted RBP8.82□□□□□ -1
APOB-201ENST00000233242 AP1M1Q9BXS5 423 aa8.82□□□□□ -1
APOB-201ENST00000233242 USP15Q9Y4E8 981 aaPredicted RBP8.82□□□□□ -1
APOB-201ENST00000233242 TRIM66O15016 1216 aa8.82□□□□□ -1
APOB-201ENST00000233242 YARSP54577 528 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 SP4Q02446 784 aa8.82□□□□□ -1
APOB-201ENST00000233242 POMGNT1Q8WZA1 660 aa8.82□□□□□ -1
APOB-201ENST00000233242 ACCSQ96QU6 501 aa8.82□□□□□ -1
APOB-201ENST00000233242 MTRQ99707 1265 aa8.82□□□□□ -1
APOB-201ENST00000233242 MORF4L2Q15014 288 aa8.82□□□□□ -1
APOB-201ENST00000233242 GPATCH4Q5T3I0 446 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 DNAJC9Q8WXX5 260 aa8.82□□□□□ -1
APOB-201ENST00000233242 VPS39Q96JC1 886 aa8.82□□□□□ -1
APOB-201ENST00000233242 KIAA1024Q9UPX6 916 aa8.82□□□□□ -1
APOB-201ENST00000233242 FAM102BQ5T8I3 360 aa8.82□□□□□ -1
APOB-201ENST00000233242 FAM167BQ9BTA0 163 aa8.82□□□□□ -1
APOB-201ENST00000233242 WWP1Q9H0M0 922 aa8.82□□□□□ -1
APOB-201ENST00000233242 HSPA9P38646 679 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 VSNL1P62760 191 aa8.82□□□□□ -1
APOB-201ENST00000233242 CNGA3Q16281 694 aa8.82□□□□□ -1
APOB-201ENST00000233242 DISC1Q9NRI5 854 aa8.82□□□□□ -1
APOB-201ENST00000233242 AATKQ6ZMQ8 1374 aa8.82□□□□□ -1
APOB-201ENST00000233242 SYCE1LA8MT33 242 aa8.82□□□□□ -1
APOB-201ENST00000233242 KPNA7A9QM74 516 aa8.82□□□□□ -1
APOB-201ENST00000233242 CFLARO15519 480 aa8.82□□□□□ -1
APOB-201ENST00000233242 GFPT2O94808 682 aa8.82□□□□□ -1
APOB-201ENST00000233242 UFL1O94874 794 aa8.82□□□□□ -1
APOB-201ENST00000233242 DLATP10515 647 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 GUCY1A3Q02108 690 aa8.82□□□□□ -1
APOB-201ENST00000233242 PSPC1Q8WXF1 523 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 GGA1Q9UJY5 639 aa8.82□□□□□ -1
APOB-201ENST00000233242 TTLL3Q9Y4R7 772 aa8.82□□□□□ -1
APOB-201ENST00000233242 DIAPH2O60879 1101 aa8.82□□□□□ -1
APOB-201ENST00000233242 TAC1P20366 129 aa8.82□□□□□ -1
APOB-201ENST00000233242 CTSWP56202 376 aa8.82□□□□□ -1
APOB-201ENST00000233242 POTEAQ6S8J7 498 aa8.82□□□□□ -1
APOB-201ENST00000233242 RAPH1Q70E73 1250 aa8.82□□□□□ -1
APOB-201ENST00000233242 SPATA21Q7Z572 469 aa8.82□□□□□ -1
APOB-201ENST00000233242 NUDCD3Q8IVD9 361 aa8.82□□□□□ -1
APOB-201ENST00000233242 SGSM3Q96HU1 749 aa8.82□□□□□ -1
APOB-201ENST00000233242 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
APOB-201ENST00000233242 TEKT3Q9BXF9 490 aa8.82□□□□□ -1
APOB-201ENST00000233242 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
APOB-201ENST00000233242 SLC44A4Q53GD3 710 aa8.82□□□□□ -1
APOB-201ENST00000233242 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
APOB-201ENST00000233242 SMYD4Q8IYR2 804 aaPredicted RBP8.82□□□□□ -1
APOB-201ENST00000233242 FBXL13Q8NEE6 735 aa8.82□□□□□ -1
APOB-201ENST00000233242 USP17L12C9JPN9 530 aa8.81□□□□□ -1
APOB-201ENST00000233242 USP17L21D6R901 530 aa8.81□□□□□ -1
APOB-201ENST00000233242 ZBED4O75132 1171 aa8.81□□□□□ -1
APOB-201ENST00000233242 NECTIN1Q15223 517 aa8.81□□□□□ -1
APOB-201ENST00000233242 SPOPLQ6IQ16 392 aa8.81□□□□□ -1
APOB-201ENST00000233242 FMR1NBQ8N0W7 255 aaPredicted RBP8.81□□□□□ -1
APOB-201ENST00000233242 BTBD6Q96KE9 485 aa8.81□□□□□ -1
APOB-201ENST00000233242 IL1RAPL1Q9NZN1 696 aa8.81□□□□□ -1
APOB-201ENST00000233242 ARHGDIAP52565 204 aa8.81□□□□□ -1
APOB-201ENST00000233242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.81□□□□□ -1
APOB-201ENST00000233242 ZBBXA8MT70 800 aa8.81□□□□□ -1
APOB-201ENST00000233242 RMDN2Q96LZ7 410 aa8.81□□□□□ -1
APOB-201ENST00000233242 FOXP3Q9BZS1 431 aa8.81□□□□□ -1
APOB-201ENST00000233242 POTEB3A0JP26 581 aa8.81□□□□□ -1
APOB-201ENST00000233242 POLR2MP0CAP2 368 aa8.81□□□□□ -1
APOB-201ENST00000233242 ARFIP2P53365 341 aa8.81□□□□□ -1
APOB-201ENST00000233242 IGBP1P78318 339 aa8.81□□□□□ -1
APOB-201ENST00000233242 HDLBPQ00341 1268 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 STAT4Q14765 748 aa8.81□□□□□ -1
APOB-201ENST00000233242 POTEBQ6S5H4 581 aa8.81□□□□□ -1
APOB-201ENST00000233242 OR9Q1Q8NGQ5 310 aa8.81□□□□□ -1
APOB-201ENST00000233242 MTBPQ96DY7 904 aa8.81□□□□□ -1
APOB-201ENST00000233242 LSP1P33241 339 aa8.81□□□□□ -1
APOB-201ENST00000233242 STX18Q9P2W9 335 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 DAB1O75553 588 aa8.81□□□□□ -1
APOB-201ENST00000233242 TCIRG1Q13488 830 aa8.81□□□□□ -1
APOB-201ENST00000233242 MED21Q13503 144 aa8.81□□□□□ -1
APOB-201ENST00000233242 POLA2Q14181 598 aa8.81□□□□□ -1
APOB-201ENST00000233242 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
APOB-201ENST00000233242 SPATA4Q8NEY3 305 aa8.81□□□□□ -1
APOB-201ENST00000233242 SEPT10Q9P0V9 454 aa8.81□□□□□ -1
APOB-201ENST00000233242 SUN2Q9UH99 717 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms