RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
HDAC7-201ENST00000080059 MRRFQ96E11 262 aaKnown RBP14.3□□□□□ -0.12
HDAC7-201ENST00000080059 PPP1R3GB7ZBB8 358 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 CEP55Q53EZ4 464 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 ZBTB8OSQ8IWT0 167 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 SLIT3O75094 1523 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 GFPT1Q06210 699 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-201ENST00000080059 KCTD2Q14681 263 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 NRBP2Q9NSY0 501 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 FEM1BQ9UK73 627 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 ZNRF3Q9ULT6 936 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 NDUFAB1O14561 156 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 KRT71Q3SY84 523 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-201ENST00000080059 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
HDAC7-201ENST00000080059 KIF13AQ9H1H9 1805 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 SLC37A4O43826 429 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 ENTPD3O75355 529 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 PPFIA1Q13136 1202 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 NCAPHQ15003 741 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 GPR162Q16538 588 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 SNRNP48Q6IEG0 339 aaKnown RBP14.28□□□□□ -0.12
HDAC7-201ENST00000080059 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 RNF146Q9NTX7 359 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 LMNB1P20700 586 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 SF3A3Q12874 501 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC7-201ENST00000080059 CDHR1Q96JP9 859 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 C7orf25Q9BPX7 421 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-201ENST00000080059 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 A0A1W2PQC6 194 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 PSMD14O00487 310 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 KIF4AO95239 1232 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 SLC7A5Q01650 507 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 LXNQ9BS40 222 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 EPB41L5Q9HCM4 733 aa14.28□□□□□ -0.12
HDAC7-201ENST00000080059 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.12
HDAC7-201ENST00000080059 H0YCG3 227 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 DDR1Q08345 913 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 NAALADL2Q58DX5 795 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 PRAMEF18Q5VWM3 479 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 ZNF70Q9UC06 446 aaPredicted RBP14.27□□□□□ -0.12
HDAC7-201ENST00000080059 GYPCP04921 128 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 NMT1P30419 496 aaKnown RBP14.27□□□□□ -0.12
HDAC7-201ENST00000080059 GCLMP48507 274 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 PTK2Q05397 1052 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 UHMK1Q8TAS1 419 aaKnown RBP14.27□□□□□ -0.12
HDAC7-201ENST00000080059 FERMT1Q9BQL6 677 aa14.27□□□□□ -0.12
HDAC7-201ENST00000080059 ESYT2A0FGR8 921 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 HEXIM1O94992 359 aaKnown RBP14.27□□□□□ -0.13
HDAC7-201ENST00000080059 IFNB1P01574 187 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 IL1R1P14778 569 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 CCND2P30279 289 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 CEP85LQ5SZL2 805 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 LRRC4BQ9NT99 713 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 CAPN11Q9UMQ6 739 aa14.27□□□□□ -0.13
HDAC7-201ENST00000080059 SMARCA1P28370 1054 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 CTNNA1P35221 906 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 MFAP3P55082 362 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 CCDC91Q7Z6B0 441 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 MAK16Q9BXY0 300 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 STMN4Q9H169 189 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 ABCB6Q9NP58 842 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 CEP72Q9P209 647 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 DNAJC12Q9UKB3 198 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 PNMA6AP0CW24 399 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 EZH2Q15910 746 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 RSBN1LQ6PCB5 846 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 RUFY4Q6ZNE9 571 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 RAB17Q9H0T7 212 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 TYW1Q9NV66 732 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 SLC16A4O15374 487 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 CYTH3O43739 400 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 NSFP46459 744 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 DEFB132Q7Z7B7 95 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 FAM151AQ8WW52 585 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 MYO1FO00160 1098 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 POLRMTO00411 1230 aaKnown RBP14.26□□□□□ -0.13
HDAC7-201ENST00000080059 TRIM49P0CI25 452 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 TRIM49CP0CI26 452 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 ECE1P42892 770 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 SLC15A2Q16348 729 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 PHLDB2Q86SQ0 1253 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 C10orf67Q8IYJ2 551 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 OTUD6BQ8N6M0 293 aa14.26□□□□□ -0.13
HDAC7-201ENST00000080059 WDR64B1ANS9 1081 aa14.25□□□□□ -0.13
HDAC7-201ENST00000080059 K7ERI5 159 aa14.25□□□□□ -0.13
HDAC7-201ENST00000080059 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
HDAC7-201ENST00000080059 EZRP15311 586 aaKnown RBP14.25□□□□□ -0.13
HDAC7-201ENST00000080059 MARK3P27448 753 aa14.25□□□□□ -0.13
HDAC7-201ENST00000080059 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms