RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tatdn3Q3U1C6 294 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Atp13a4Q5XF90 1193 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Klhl20Q8VCK5 604 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 St5Q924W7 1134 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Dnajc19Q9CQV7 116 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 4930449I24RikQ9D5E3 319 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 AllcQ9JHX6 414 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Gfpt2Q9Z2Z9 682 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 PtgdrP70263 357 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Psd3Q2PFD7 1037 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Qrich1Q3UA37 777 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ccpg1Q640L3 753 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Grm4Q68EF4 912 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 WhrnQ80VW5 918 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Trim47Q8C0E3 641 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Synpo2Q91YE8 1087 aaKnown RBP17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 DexiQ9WUQ7 95 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Heg1E9Q7X6 1337 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Opa1P58281 960 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Acsbg2Q2XU92 667 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Eepd1Q3TGW2 569 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Akap4Q60662 849 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 AsphQ8BSY0 741 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ifih1Q8R5F7 1025 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Mettl13Q91YR5 698 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Eef1gQ9D8N0 437 aaKnown RBP17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Nlrp5Q9R1M5 1163 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Mtmr2Q9Z2D1 643 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Kcnh2O35219 1162 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ap1b1O35643 943 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Dpcr1Q3TNW5 500 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Krt14Q61781 484 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Anks6Q6GQX6 883 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Nyap1Q6PFX7 833 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Cyp2d26Q8CIM7 500 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Spats2Q8K1N4 545 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Fam133bQ9CVI2 245 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Fam111aQ9D2L9 613 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Arl2bpQ9D385 163 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tex21Q9R0U9 575 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Arfgef1G3X9K3 1846 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Rbbp6P97868 1790 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 C4bP01029 1738 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Zfp984A2A7A2 547 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Nmt1O70310 496 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ctnna1P26231 906 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tex35Q14BK3 207 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Slc30a9Q5IRJ6 567 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Sdccag8Q80UF4 717 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 FtoQ8BGW1 502 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 GanQ8CA72 597 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Smc6Q924W5 1097 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Rhobtb3Q9CTN4 611 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Lrrc57Q9D1G5 239 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Cdc42ep4Q9JM96 349 aaKnown RBP17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ecm29Q6PDI5 1840 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ltn1Q6A009 1767 aa17.71■□□□□ 0.43
Trim28-201ENSMUST00000005705 Vmn2r71L7N2D8 855 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cyp2e1Q05421 493 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cacna2d4Q5RJF7 1116 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Npdc1Q64322 332 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Spns2Q91VM4 549 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Angptl3Q9R182 455 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ppp4cP97470 307 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Tmed8Q3UHI4 326 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Fbxw10Q5SUS0 1030 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gas8Q60779 478 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 AsnsQ61024 561 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Kirrel3Q8BR86 778 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Morc2bQ8C5W4 1022 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Slc35f6Q8VE96 372 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Spata17Q9D552 379 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 GsdmeQ9Z2D3 512 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Eftud2O08810 971 aaKnown RBP17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Art2bO35975 289 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 LdhaP06151 332 aaKnown RBP17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Muc3aQ3U5A2 218 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Klhdc9Q3USL1 350 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Efcab14Q8BGQ6 484 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Tdrd3Q91W18 743 aaKnown RBP17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Coa7Q921H9 231 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 LrmdaQ9D9B4 229 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Arhgef7Q9ES28 862 aa17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Prpf40aQ9R1C7 953 aaKnown RBP17.7■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gm382B1AXN3 1250 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Pde6bP23440 856 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Irx1P81068 480 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 TraddQ3U0V2 310 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Lrig2Q52KR2 1054 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Trpc6Q61143 930 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Sestd1Q80UK0 696 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Naa15Q80UM3 865 aaKnown RBP17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Bank1Q80VH0 783 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 BlmhQ8R016 455 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Nova2D3YVV7 556 aaKnown RBP17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ccdc78D3Z5T1 437 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Psmc2P46471 433 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 GalcP54818 684 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Etv6P97360 485 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 4921524L21RikQ9D5T2 438 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms