RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 SAMD11Q96NU1 681 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 NSUN3Q9H649 340 aaKnown RBP11.56□□□□□ -0.56
PHGDH-222ENST00000641587 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 RTEL1Q9NZ71 1219 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 ZNF318Q5VUA4 2279 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 PALM3A6NDB9 673 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-222ENST00000641587 GCOM1H8Y6P7 765 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-222ENST00000641587 NOP56O00567 594 aaKnown RBP11.55□□□□□ -0.56
PHGDH-222ENST00000641587 GRM6O15303 877 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 EPB41L2O43491 1005 aaKnown RBP11.55□□□□□ -0.56
PHGDH-222ENST00000641587 POLR2MP0CAP2 368 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 TGFB3P10600 412 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 GHRP10912 638 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 ALADP13716 330 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
PHGDH-222ENST00000641587 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 COL19A1Q14993 1142 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 CSPP1Q1MSJ5 1256 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 RUFY4Q6ZNE9 571 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 GPR20Q99678 358 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 KRT23Q9C075 422 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 KIAA1671Q9BY89 1806 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 KAT6AQ92794 2004 aa11.55□□□□□ -0.56
PHGDH-222ENST00000641587 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 LINC01565O15544 149 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 TBX10O75333 385 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 CHRNA1P02708 482 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 IRS1P35568 1242 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 MRE11P49959 708 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 ADAM17P78536 824 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 NHLH1Q02575 133 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 HYAL1Q12794 435 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 GRM4Q14833 912 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 PUS10Q3MIT2 529 aaKnown RBP11.54□□□□□ -0.56
PHGDH-222ENST00000641587 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 METTL7BQ6UX53 244 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 HFE2Q6ZVN8 426 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 FBXL18Q96ME1 805 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 INPP4AQ96PE3 977 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-222ENST00000641587 RIOX1Q9H6W3 641 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 CNNM2Q9H8M5 875 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 ADGRA3Q8IWK6 1321 aa11.54□□□□□ -0.56
PHGDH-222ENST00000641587 TECTAO75443 2155 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 SPATA31C2B4DYI2 1134 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 SLC27A2O14975 620 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 CAND2O75155 1236 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 ICAM3P32942 547 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 HSPA4P34932 840 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 NT5C2P49902 561 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 ADHFE1Q8IWW8 467 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 FIBCD1Q8N539 461 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 ZBTB10Q96DT7 871 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 IL17RAQ96F46 866 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 RC3H2Q9HBD1 1191 aaKnown RBP11.53□□□□□ -0.56
PHGDH-222ENST00000641587 MAP3K20Q9NYL2 800 aaKnown RBP11.53□□□□□ -0.56
PHGDH-222ENST00000641587 MUTYHQ9UIF7 546 aa11.53□□□□□ -0.56
PHGDH-222ENST00000641587 TTC3P53804 2025 aa11.52□□□□□ -0.56
PHGDH-222ENST00000641587 C5orf67F2Z3F1 127 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 FIBPO43427 364 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 MBTPS2O43462 519 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 MARK3P27448 753 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
PHGDH-222ENST00000641587 MGAT3Q09327 533 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 NEDD9Q14511 834 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 LPIN1Q14693 890 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 CTC1Q2NKJ3 1217 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 GNPTABQ3T906 1256 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 SAMD3Q8N6K7 520 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 LINC01599Q8WXQ3 324 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 APBB2Q92870 758 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 IGFLR1Q9H665 355 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 LOXHD1Q8IVV2 1947 aa11.52□□□□□ -0.57
PHGDH-222ENST00000641587 USP34Q70CQ2 3546 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 PNMA6FA0A0J9YX94 578 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 IFIT3O14879 490 aaKnown RBP11.51□□□□□ -0.57
PHGDH-222ENST00000641587 GNAT1P11488 350 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 BMPR1AP36894 532 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 CAMK1Q14012 370 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 NECTIN1Q15223 517 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 SMAD2Q15796 467 aaKnown RBP11.51□□□□□ -0.57
PHGDH-222ENST00000641587 USP17L6PQ6QN14 398 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 PHOX2BQ99453 314 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-222ENST00000641587 EHMT1Q9H9B1 1298 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 ALG13Q9NP73 1137 aaKnown RBP11.51□□□□□ -0.57
PHGDH-222ENST00000641587 PRKAG3Q9UGI9 489 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-222ENST00000641587 FAM50BQ9Y247 325 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms