RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 PLXNA1Q9UIW2 1896 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 POTEMA6NI47 508 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 SLC26A4O43511 780 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 ATP9AO75110 1047 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 PSMD10O75832 226 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 FARP2O94887 1054 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-220ENST00000641570 ACTR2P61160 394 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 UTP14CQ5TAP6 766 aaKnown RBP14.53□□□□□ -0.08
PHGDH-220ENST00000641570 ADALQ6DHV7 355 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
PHGDH-220ENST00000641570 PPTC7Q8NI37 304 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 GJA10Q969M2 543 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.53□□□□□ -0.08
PHGDH-220ENST00000641570 RNF208Q9H0X6 261 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 ZNF302Q9NR11 478 aa14.53□□□□□ -0.08
PHGDH-220ENST00000641570 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
PHGDH-220ENST00000641570 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 KBTBD13C9JR72 458 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 KPNA6O60684 536 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 ARIH2O95376 493 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 P4HBP07237 508 aaKnown RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 MYL3P08590 195 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 CCND3P30281 292 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 TCF7P36402 384 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 CHMP4BP1P59074 171 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 TRIM32Q13049 653 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 SEMA3FQ13275 785 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 EPHA7Q15375 998 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 TPH2Q8IWU9 490 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 CEP57L1Q8IYX8 460 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 C4orf32Q8N8J7 132 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 PCSK9Q8NBP7 692 aaKnown RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 ARRDC4Q8NCT1 418 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 SYMPKQ92797 1274 aaKnown RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 COPS5Q92905 334 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 EMID1Q96A84 441 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-220ENST00000641570 CHAMP1Q96JM3 812 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 CLIC6Q96NY7 704 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 KATNAL1Q9BW62 490 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 KATNBL1Q9H079 304 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
PHGDH-220ENST00000641570 MYH7BA7E2Y1 1941 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 A0A1W2PQ27 194 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 A0A1W2PQ64 194 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 A0A1W2PQD8 194 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 KINO60870 393 aaKnown RBP14.51□□□□□ -0.09
PHGDH-220ENST00000641570 MBD3O95983 291 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 STAT6P42226 847 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 PSMC5P62195 406 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 CAP1Q01518 475 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 CYP4A11Q02928 519 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 FSCN1Q16658 493 aaKnown RBP14.51□□□□□ -0.09
PHGDH-220ENST00000641570 SPECC1Q5M775 1068 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 RRAGBQ5VZM2 374 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 PDXDC2PQ6P474 469 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 CCDC62Q6P9F0 684 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 CLEC17AQ6ZS10 378 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 IGSF22Q8N9C0 903 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 TMEM87AQ8NBN3 555 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 AFG1LQ8WV93 481 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 VTI1AQ96AJ9 217 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 FAM167AQ96KS9 214 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 EIF2AK1Q9BQI3 630 aaKnown RBP14.51□□□□□ -0.09
PHGDH-220ENST00000641570 SMARCAD1Q9H4L7 1026 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 ZSWIM4Q9H7M6 989 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 TUFT1Q9NNX1 390 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 GABBR1Q9UBS5 961 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
PHGDH-220ENST00000641570 ZSWIM8A7E2V4 1837 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 CCL5P13501 91 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 CMA1P23946 247 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 SYKP43405 635 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 QARSP47897 775 aaKnown RBP14.5□□□□□ -0.09
PHGDH-220ENST00000641570 SLC26A2P50443 739 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 SP2Q02086 613 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 ARHGAP1Q07960 439 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 GNASQ5JWF2 1037 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 GJC2Q5T442 439 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-220ENST00000641570 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 SWSAP1Q6NVH7 229 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 IQUBQ8NA54 791 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 BANK1Q8NDB2 785 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-220ENST00000641570 GPR20Q99678 358 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 LXNQ9BS40 222 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 LRRC27Q9C0I9 530 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 DNM3Q9UQ16 869 aa14.5□□□□□ -0.09
PHGDH-220ENST00000641570 ZNFX1Q9P2E3 1918 aaKnown RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 SYNRGQ9UMZ2 1314 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 DHX15O43143 795 aaKnown RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 EDIL3O43854 480 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 PPFIA4O75335 1185 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 SSBP05455 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 KRT18P05783 430 aaKnown RBP14.49□□□□□ -0.09
PHGDH-220ENST00000641570 MMP3P08254 477 aa14.49□□□□□ -0.09
PHGDH-220ENST00000641570 MUTP22033 750 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms