RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 YBX3P16989 372 aaKnown RBP eCLIP10.49□□□□□ -0.73
PAX6-273ENST00000640610 ELF1P32519 619 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 NOVP48745 357 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 NAP1L1P55209 391 aaKnown RBP10.49□□□□□ -0.73
PAX6-273ENST00000640610 NFIAQ12857 509 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 KCTD1Q719H9 257 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 KIAA0825Q8IV33 1275 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 P2RX5Q93086 422 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 PNMA5Q96PV4 448 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 TUBGCP2Q9BSJ2 902 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 EPN3Q9H201 632 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 ZNHIT6Q9NWK9 470 aaKnown RBP10.49□□□□□ -0.73
PAX6-273ENST00000640610 MCM8Q9UJA3 840 aa10.49□□□□□ -0.73
PAX6-273ENST00000640610 MYMKA6NI61 221 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 BRD2P25440 801 aaKnown RBP10.48□□□□□ -0.73
PAX6-273ENST00000640610 NF2P35240 595 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 TNNI2P48788 182 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 FKBP1AP62942 108 aaKnown RBP10.48□□□□□ -0.73
PAX6-273ENST00000640610 ECM1Q16610 540 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 EMC10Q5UCC4 262 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 TRIM58Q8NG06 486 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 JDP2Q8WYK2 163 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 CNOT6LQ96LI5 555 aaKnown RBP10.48□□□□□ -0.73
PAX6-273ENST00000640610 MTMR9Q96QG7 549 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 SEMA6BQ9H3T3 888 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 THAP9Q9H5L6 903 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 JMJD4Q9H9V9 463 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 KLC4Q9NSK0 619 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 SNX12Q9UMY4 172 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 ZNF185O15231 689 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 RAD21O60216 631 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 LSP1P33241 339 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 CDR1P51861 262 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 ACTN3Q08043 901 aaPredicted RBP10.48□□□□□ -0.73
PAX6-273ENST00000640610 KIF5AQ12840 1032 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 CALCRLQ16602 461 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 NAA35Q5VZE5 725 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 TTC19Q6DKK2 380 aaPredicted RBP10.48□□□□□ -0.73
PAX6-273ENST00000640610 ADGRF4Q8IZF3 695 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 ARL8AQ96BM9 186 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 C7orf25Q9BPX7 421 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 USP40Q9NVE5 1235 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 STIM2Q9P246 746 aa10.48□□□□□ -0.73
PAX6-273ENST00000640610 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 RCCD1A6NED2 376 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 MPHOSPH10O00566 681 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 VIL1P09327 827 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 CCNE1P24864 410 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 EEF1GP26641 437 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 SHMT1P34896 483 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 ADCY7P51828 1080 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 CXCL9Q07325 125 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 MIIPQ5JXC2 388 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 WLSQ5T9L3 541 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 CREG2Q8IUH2 290 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 CCDC50Q8IVM0 306 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 RETREG2Q8NC44 543 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 AK8Q96MA6 479 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 LRRC1Q9BTT6 524 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 NUP58Q9BVL2 599 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 VEZTQ9HBM0 779 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 MAGEC2Q9UBF1 373 aaPredicted RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 LRWD1Q9UFC0 647 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 FOCADQ5VW36 1801 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 TACC1O75410 805 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 TAL1P17542 331 aaPredicted RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 VAV2P52735 878 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 SATB1Q01826 763 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 LRRC41Q15345 812 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 GLE1Q53GS7 698 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 RSBN1LQ6PCB5 846 aaPredicted RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 C1orf131Q8NDD1 294 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 SPATA4Q8NEY3 305 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 ZNF473Q8WTR7 871 aaKnown RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 TTYH3Q9C0H2 523 aa10.47□□□□□ -0.73
PAX6-273ENST00000640610 ACTR5Q9H9F9 607 aaPredicted RBP10.47□□□□□ -0.73
PAX6-273ENST00000640610 GOLGA6L7A0A1B0GV03 622 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 EPHB6O15197 1021 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 PPP1R37O75864 691 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 RASSF9O75901 435 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 PLEKP08567 350 aaPredicted RBP10.46□□□□□ -0.73
PAX6-273ENST00000640610 SNHG28P0DPA3 235 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 MTIF2P46199 727 aaKnown RBP10.46□□□□□ -0.73
PAX6-273ENST00000640610 NT5C2P49902 561 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 TBC1D8BQ0IIM8 1120 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 TCP10Q12799 353 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 CEP85LQ5SZL2 805 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 CDC42EP5Q6NZY7 148 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 SLF2Q8IX21 1173 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 TSEN2Q8NCE0 465 aaKnown RBP10.46□□□□□ -0.73
PAX6-273ENST00000640610 DHTKD1Q96HY7 919 aaPredicted RBP10.46□□□□□ -0.73
PAX6-273ENST00000640610 ZIM3Q96PE6 472 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 LACRTQ9GZZ8 138 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 CD248Q9HCU0 757 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 SERPINB13Q9UIV8 391 aa10.46□□□□□ -0.73
PAX6-273ENST00000640610 USO1O60763 962 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms