RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 RUBCNQ92622 972 aa17.69■□□□□ 0.42
NRXN1-229ENST00000628515 MAGEF1Q9HAY2 307 aa17.69■□□□□ 0.42
NRXN1-229ENST00000628515 BLOC1S4Q9NUP1 217 aa17.69■□□□□ 0.42
NRXN1-229ENST00000628515 NOVA2Q9UNW9 492 aaKnown RBP17.69■□□□□ 0.42
NRXN1-229ENST00000628515 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.69■□□□□ 0.42
NRXN1-229ENST00000628515 DOCK2Q92608 1830 aa17.69■□□□□ 0.42
NRXN1-229ENST00000628515 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 HMGB1P1B2RPK0 211 aaPredicted RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 TM4SF1P30408 202 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 PRPHP41219 470 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 ITGB3BPQ13352 177 aaPredicted RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 RC3H1Q5TC82 1133 aaKnown RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 ADAT2Q7Z6V5 191 aaKnown RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 PIGSQ96S52 555 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 PJA2O43164 708 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 SERPING1P05155 500 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 CCDC172P0C7W6 258 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 PPP1R2P41236 205 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 QPCTQ16769 361 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 RNF10Q8N5U6 811 aaKnown RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 SLC40A1Q9NP59 571 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 FAM107AO95990 144 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 PDHBP11177 359 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 TNNI2P48788 182 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 COA7Q96BR5 231 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 TAF1DQ9H5J8 278 aaPredicted RBP17.68■□□□□ 0.42
NRXN1-229ENST00000628515 HAUS2Q9NVX0 235 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 COL4A3BPQ9Y5P4 624 aa17.68■□□□□ 0.42
NRXN1-229ENST00000628515 FRMD3A2A2Y4 597 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 LCA5LO95447 670 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 ACTN1P12814 892 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 BRD2P25440 801 aaKnown RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 SPRED3Q2MJR0 410 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 DGKHQ86XP1 1220 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 MYOCDQ8IZQ8 938 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 MXD3Q9BW11 206 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 FRMPD2Q68DX3 1309 aaPredicted RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 GRID2IPA4D2P6 1211 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 SLC37A4O43826 429 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 FLT3P36888 993 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 IFFO1Q0D2I5 559 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 NAB2Q15742 525 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 ASIC2Q16515 512 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 ASTE1Q2TB18 679 aaPredicted RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 KRT71Q3SY84 523 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 KRT79Q5XKE5 535 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 CPLX4Q7Z7G2 160 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 SPATS2Q86XZ4 545 aaKnown RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 GUF1Q8N442 669 aaKnown RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 ZKSCAN4Q969J2 545 aaPredicted RBP17.67■□□□□ 0.42
NRXN1-229ENST00000628515 IQCDQ96DY2 449 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 SPAG5Q96R06 1193 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 VCPKMTQ9H867 229 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 FBXL5Q9UKA1 691 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
NRXN1-229ENST00000628515 PHF20L1A8MW92 1017 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 TNFRSF8P28908 595 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 GNA11P29992 359 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 PRPF4BQ13523 1007 aaKnown RBP17.66■□□□□ 0.42
NRXN1-229ENST00000628515 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 PNMA5Q96PV4 448 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 FGFBP2Q9BYJ0 223 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 AMACRQ9UHK6 382 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 SSU72P8A0A1W2PR75 194 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 DCDC2CA8MYV0 355 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 DAPK3O43293 454 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 EIF6P56537 245 aaKnown RBP17.66■□□□□ 0.42
NRXN1-229ENST00000628515 GPSM2P81274 684 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 ARFGAP2Q8N6H7 521 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 ZNF622Q969S3 477 aaKnown RBP eCLIP17.66■□□□□ 0.42
NRXN1-229ENST00000628515 INPP4AQ96PE3 977 aaPredicted RBP17.66■□□□□ 0.42
NRXN1-229ENST00000628515 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 TMBIM4Q9HC24 238 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 CEP72Q9P209 647 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 NPHP3-ACAD11A0A0J9YXS1 232 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 GMNCA6NCL1 334 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 MEI1Q5TIA1 1274 aa17.66■□□□□ 0.42
NRXN1-229ENST00000628515 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
NRXN1-229ENST00000628515 DDX20Q9UHI6 824 aaKnown RBP17.66■□□□□ 0.42
NRXN1-229ENST00000628515 TLDC2A0PJX2 215 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 CHUKO15111 745 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
NRXN1-229ENST00000628515 MAGOHP61326 146 aaKnown RBP17.65■□□□□ 0.42
NRXN1-229ENST00000628515 LRRC63Q05C16 580 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 MDM1Q8TC05 714 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 MAGOHBQ96A72 148 aaKnown RBP17.65■□□□□ 0.42
NRXN1-229ENST00000628515 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
NRXN1-229ENST00000628515 RNF14Q9UBS8 474 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 KRIT1O00522 736 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 NOL4O94818 638 aa17.65■□□□□ 0.42
NRXN1-229ENST00000628515 FKBP3Q00688 224 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms