RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
GABRB3-216ENST00000628124 ATP8A1Q9Y2Q0 1164 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 GOLGA8JA6NMD2 632 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 GOLGA8SH3BPF8 625 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 DAB1O75553 588 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 POLA2Q14181 598 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 C8orf34Q49A92 452 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 MAML1Q92585 1016 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 CNOT6LQ96LI5 555 aaKnown RBP9.6□□□□□ -0.87
GABRB3-216ENST00000628124 THRAP3Q9Y2W1 955 aaKnown RBP9.6□□□□□ -0.87
GABRB3-216ENST00000628124 E7EWF7 191 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 TADA3O75528 432 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.87
GABRB3-216ENST00000628124 STAT2P52630 851 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 GCKRQ14397 625 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 SLFN13Q68D06 897 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
GABRB3-216ENST00000628124 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 MOSPD1Q9UJG1 213 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 ZMYM6O95789 1325 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 H0Y626 953 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 HNRNPRO43390 633 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TRIM16O95361 564 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 BRD1O95696 1058 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 KRT7P08729 469 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 NR2F2P24468 414 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 MMS22LQ6ZRQ5 1243 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 FANCBQ8NB91 859 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TUBGCP2Q9BSJ2 902 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 DESI2Q9BSY9 194 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 SLC7A5P2Q9GIP4 190 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 POLR3AO14802 1390 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 DHX9Q08211 1270 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 SPARCL1Q14515 664 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 E2F5Q15329 346 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 MAN2A1Q16706 1144 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ZNF790Q6PG37 636 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 EPB41L5Q9HCM4 733 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 SLC39A2Q9NP94 309 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 HACD3Q9P035 362 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ASXL1Q8IXJ9 1541 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 RNF103-CHMP3A0A140T963 221 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 FRMD3A2A2Y4 597 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 DEAF1O75398 565 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 WBP4O75554 376 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ATXN8OSP0DMR3 200 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 MAPRE2Q15555 327 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 GPR162Q16538 588 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 BBS9Q3SYG4 887 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ASPRV1Q53RT3 343 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 FAM47AQ5JRC9 791 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 FBXO31Q5XUX0 539 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 KCTD16Q68DU8 428 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 THEM5Q8N1Q8 247 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 RBM46Q8TBY0 533 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 LARP4BQ92615 738 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 CFAP36Q96G28 342 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ACAP3Q96P50 834 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 OLFM3Q96PB7 478 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TRPV6Q9H1D0 765 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 STOML1Q9UBI4 398 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TMEM232C9JQI7 657 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 HSPA1AP0DMV8 641 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 HSPA1BP0DMV9 641 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TRPC1P48995 793 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 RPS8P62241 208 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TFDP2Q14188 446 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 FAM133BQ5BKY9 247 aaKnown RBP9.59□□□□□ -0.87
GABRB3-216ENST00000628124 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 ANO5Q75V66 913 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 TTC8Q8TAM2 541 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 PALMDQ9NP74 551 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 MPP6Q9NZW5 540 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 PCDHA1Q9Y5I3 950 aa9.59□□□□□ -0.87
GABRB3-216ENST00000628124 DPYSL4O14531 572 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 COPEO14579 308 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 ZNF18P17022 549 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 GTF2IP78347 998 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 CUL1Q13616 776 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 KRT72Q14CN4 511 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 LRRC31Q6UY01 552 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 KIRREL3Q8IZU9 778 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 C7orf31Q8N865 590 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 ACRBPQ8NEB7 543 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 IP6K1Q92551 441 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 RRP15Q9Y3B9 282 aaKnown RBP9.58□□□□□ -0.88
GABRB3-216ENST00000628124 DENND4BO75064 1496 aaPredicted RBP9.58□□□□□ -0.88
GABRB3-216ENST00000628124 TRPM2O94759 1503 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 UBXN8O00124 270 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 NEMP1O14524 444 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 ZSCAN9O15535 394 aaPredicted RBP9.58□□□□□ -0.88
GABRB3-216ENST00000628124 MECOMQ03112 1051 aa9.58□□□□□ -0.88
GABRB3-216ENST00000628124 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms