RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 NFRKBQ6P4R8 1299 aa22.97■■□□□ 1.27
PTCD3-220ENST00000627371 C7orf61Q8IZ16 206 aa22.97■■□□□ 1.27
PTCD3-220ENST00000627371 TOX2Q96NM4 488 aa22.97■■□□□ 1.27
PTCD3-220ENST00000627371 KCNMB3Q9NPA1 279 aa22.97■■□□□ 1.27
PTCD3-220ENST00000627371 TCEAL9Q9UHQ7 104 aa22.97■■□□□ 1.27
PTCD3-220ENST00000627371 TRIP12Q14669 1992 aaPredicted RBP22.97■■□□□ 1.27
PTCD3-220ENST00000627371 TBX3O15119 743 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 PQBP1O60828 265 aaKnown RBP22.96■■□□□ 1.27
PTCD3-220ENST00000627371 GAS7O60861 476 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 ATG7O95352 703 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 TRAPPC10P48553 1259 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 TLE2Q04725 743 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 MFSD10Q14728 455 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 UTP14CQ5TAP6 766 aaKnown RBP22.96■■□□□ 1.27
PTCD3-220ENST00000627371 POTEDQ86YR6 584 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 FAM20AQ96MK3 541 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 TEKT3Q9BXF9 490 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 ZNF215Q9UL58 517 aaPredicted RBP22.96■■□□□ 1.27
PTCD3-220ENST00000627371 EMSYQ7Z589 1322 aa22.96■■□□□ 1.27
PTCD3-220ENST00000627371 H3BRB1 525 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 CEP290O15078 2479 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 LGR5O75473 907 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 PSMD10O75832 226 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 HSP90AA1P07900 732 aaKnown RBP22.95■■□□□ 1.26
PTCD3-220ENST00000627371 PTPN11Q06124 597 aaPredicted RBP22.95■■□□□ 1.26
PTCD3-220ENST00000627371 KIAA0753Q2KHM9 967 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 TRIM50Q86XT4 487 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 FAM126BQ8IXS8 530 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 SMAP1Q8IYB5 467 aaPredicted RBP22.95■■□□□ 1.26
PTCD3-220ENST00000627371 GJA10Q969M2 543 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 TUT1Q9H6E5 874 aaKnown RBP22.95■■□□□ 1.26
PTCD3-220ENST00000627371 NOL7Q9UMY1 257 aaKnown RBP22.95■■□□□ 1.26
PTCD3-220ENST00000627371 NR2E3Q9Y5X4 410 aa22.95■■□□□ 1.26
PTCD3-220ENST00000627371 LTBP2Q14767 1821 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 DCDC2CA8MYV0 355 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 ATP2B1P20020 1258 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 ORC2Q13416 577 aaPredicted RBP22.94■■□□□ 1.26
PTCD3-220ENST00000627371 ABHD15Q6UXT9 468 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 SESTD1Q86VW0 696 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 HAS1Q92839 578 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 PCYT2Q99447 389 aa22.94■■□□□ 1.26
PTCD3-220ENST00000627371 IGKV6D-21A0A0A0MT36 114 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
PTCD3-220ENST00000627371 NEMFO60524 1076 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 SUPT20HL2P0C7V6 817 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 SYT1P21579 422 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 CHMP4BP1P59074 171 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 FAM47CQ5HY64 1035 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 TTC38Q5R3I4 469 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 MIS18BP1Q6P0N0 1132 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 B3GNT9Q6UX72 402 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 SMARCAD1Q9H4L7 1026 aa22.93■■□□□ 1.26
PTCD3-220ENST00000627371 MYH15Q9Y2K3 1946 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 WDR64B1ANS9 1081 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 TLR3O15455 904 aaKnown RBP22.92■■□□□ 1.26
PTCD3-220ENST00000627371 CD4P01730 458 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 CLTBP09497 229 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 MCM7P33993 719 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 FAAP100Q0VG06 881 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 CALCRLQ16602 461 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 SLFN12Q8IYM2 578 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 C7orf31Q8N865 590 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 PPP1R13LQ8WUF5 828 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 GLG1Q92896 1179 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 UNC45AQ9H3U1 944 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 AZI2Q9H6S1 392 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 PDLIM7Q9NR12 457 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 ERAP1Q9NZ08 941 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 PCDHA10Q9Y5I2 948 aa22.92■■□□□ 1.26
PTCD3-220ENST00000627371 B4GALT4O60513 344 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 BAG4O95429 457 aaKnown RBP22.91■■□□□ 1.26
PTCD3-220ENST00000627371 SFNP31947 248 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 TOB1P50616 345 aaPredicted RBP22.91■■□□□ 1.26
PTCD3-220ENST00000627371 JAK3P52333 1124 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 PLPPR4Q7Z2D5 763 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 CCDC60Q8IWA6 550 aaPredicted RBP22.91■■□□□ 1.26
PTCD3-220ENST00000627371 RDM1Q8NG50 284 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 AFAP1L1Q8TED9 768 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 HDAC6Q9UBN7 1215 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 GTF2IRD1Q9UHL9 959 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 VAV3Q9UKW4 847 aa22.91■■□□□ 1.26
PTCD3-220ENST00000627371 BACH1O14867 736 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 CHMP2AO43633 222 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 MARCH6O60337 910 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 PSAPP07602 524 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 STAT5BP51692 787 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 PPP2R5CQ13362 524 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 ZNF174Q15697 407 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 RILPL1Q5EBL4 403 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 FAM160B1Q5W0V3 765 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 BRAPQ7Z569 592 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 MTMR9Q96QG7 549 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 DISC1Q9NRI5 854 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 TRMT13Q9NUP7 481 aaKnown RBP22.9■■□□□ 1.26
PTCD3-220ENST00000627371 SAMM50Q9Y512 469 aa22.9■■□□□ 1.26
PTCD3-220ENST00000627371 STX6O43752 255 aa22.89■■□□□ 1.25
PTCD3-220ENST00000627371 SMIM10L2AP0DMW4 78 aa22.89■■□□□ 1.25
PTCD3-220ENST00000627371 SMIM10L2BP0DMW5 78 aa22.89■■□□□ 1.25
PTCD3-220ENST00000627371 MARK3P27448 753 aa22.89■■□□□ 1.25
PTCD3-220ENST00000627371 SLC26A2P50443 739 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms