RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CTNNA2P26232 953 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 SLCO1A2P46721 670 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 PLCB3Q01970 1234 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 RBM26Q5T8P6 1007 aaKnown RBP7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 GSTA5Q7RTV2 222 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 SYCE1Q8N0S2 351 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 C7orf25Q9BPX7 421 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 GLT8D2Q9H1C3 349 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 PCIF1Q9H4Z3 704 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 KBTBD4Q9NVX7 518 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 MTUS1Q9ULD2 1270 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 A6NNZ2 444 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 SLC37A4O43826 429 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 APBA1Q02410 837 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 CTTNQ14247 550 aaKnown RBP7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 MESDQ14696 234 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 TUBB8Q3ZCM7 444 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ALS2CLQ60I27 953 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 FAM186BQ8IYM0 893 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 SLFN12Q8IYM2 578 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ADGRF4Q8IZF3 695 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 MTRQ99707 1265 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ANO3Q9BYT9 981 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 CEP72Q9P209 647 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 NF2P35240 595 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 GPSM2P81274 684 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 PSMD2Q13200 908 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 DENND2CQ68D51 928 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 TADA2BQ86TJ2 420 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ANKRD42Q8N9B4 389 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 NAP1L3Q99457 506 aaPredicted RBP7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 PLVAPQ9BX97 442 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 AMNQ9BXJ7 453 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ZMYND12Q9H0C1 365 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 ARHGAP20Q9P2F6 1191 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 TARSL2A2RTX5 802 aaKnown RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 RCCD1A6NED2 376 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 PDE2AO00408 941 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 FANCGO15287 622 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 RGS16O15492 202 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 CYTH3O43739 400 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 HARSP12081 509 aaKnown RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 KLRC1P26715 233 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 IRAK1P51617 712 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 IRX3P78415 501 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ZNF211Q13398 564 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 CDC37Q16543 378 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 LRRC31Q6UY01 552 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 DDX42Q86XP3 938 aaKnown RBP eCLIP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 PPM1KQ8N3J5 372 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 UBL4BQ8N7F7 174 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 SPZ1Q9BXG8 430 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 BAIAP2L1Q9UHR4 511 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 TRPM3Q9HCF6 1732 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ZSCAN5CA6NGD5 496 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 LRRC10BA6NIK2 292 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 TOM1O60784 492 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 FGGP02679 453 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 MYCLP12524 364 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 GCFC2P16383 781 aaKnown RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 FUT2Q10981 343 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 MUM1L1Q5H9M0 696 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 CACNA2D3Q8IZS8 1091 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 OR2W6PQ8NHA6 318 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 SPATA20Q8TB22 786 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 MAGOHBQ96A72 148 aaKnown RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 MXD3Q9BW11 206 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 EHD4Q9H223 541 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 MAP2K7O14733 419 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ADAMTS3O15072 1205 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 SLC9A1P19634 815 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 MTMR3Q13615 1198 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 RCSD1Q6JBY9 416 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 WDR93Q6P2C0 686 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 PHLDB2Q86SQ0 1253 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 HOOK3Q86VS8 718 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ARL8AQ96BM9 186 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 FAM212AQ96EL1 285 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ERGIC2Q96RQ1 377 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 NSRP1Q9H0G5 558 aaKnown RBP7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 RAB17Q9H0T7 212 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 RNF14Q9UBS8 474 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 AMACRQ9UHK6 382 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 USP21Q9UK80 565 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 USTQ9Y2C2 406 aa7.49□□□□□ -1.21
SYNPO2-206ENST00000610556 ZBTB5O15062 677 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms