RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 TAF4BQ92750 862 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 NUCKS1Q9H1E3 243 aaKnown RBP18.59■□□□□ 0.57
TNIP1-220ENST00000610535 ISCUQ9H1K1 167 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 USP17L5A8MUK1 530 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 LDHBP07195 334 aaKnown RBP18.59■□□□□ 0.57
TNIP1-220ENST00000610535 FLT3P36888 993 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 PROM2Q8N271 834 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 CYFIP2Q96F07 1278 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 EYA3Q99504 573 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 PLCB1Q9NQ66 1216 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 PANK4Q9NVE7 773 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 GOLGA6L10A6NI86 522 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 H0YGN5 161 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 GCOM1H8Y6P7 765 aaPredicted RBP18.58■□□□□ 0.57
TNIP1-220ENST00000610535 MYZAPP0CAP1 466 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 ACTN1P12814 892 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 MAP2K2P36507 400 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 ACTN3Q08043 901 aaPredicted RBP18.58■□□□□ 0.57
TNIP1-220ENST00000610535 PSMD2Q13200 908 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 TBC1D9BQ66K14 1250 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 CCDC13Q8IYE1 715 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 NFS1Q9Y697 457 aa18.58■□□□□ 0.57
TNIP1-220ENST00000610535 FRMPD2Q68DX3 1309 aaPredicted RBP18.58■□□□□ 0.57
TNIP1-220ENST00000610535 NPHP3-ACAD11A0A0J9YXS1 232 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 PTK2Q05397 1052 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 FAM26FQ5R3K3 315 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 PPP4R3AQ6IN85 833 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 C6orf89Q6UWU4 347 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 CDK8P49336 464 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 SETQ01105 290 aaPredicted RBP18.58■□□□□ 0.56
TNIP1-220ENST00000610535 ZNF844Q08AG5 666 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 ASIC2Q16515 512 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 QPCTQ16769 361 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 SPRED3Q2MJR0 410 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 TRIM59Q8IWR1 403 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 C1orf131Q8NDD1 294 aaKnown RBP18.58■□□□□ 0.56
TNIP1-220ENST00000610535 DDX47Q9H0S4 455 aaKnown RBP18.58■□□□□ 0.56
TNIP1-220ENST00000610535 VCPKMTQ9H867 229 aa18.58■□□□□ 0.56
TNIP1-220ENST00000610535 CTNNA1P35221 906 aaKnown RBP18.57■□□□□ 0.56
TNIP1-220ENST00000610535 PDIA5Q14554 519 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 SPTY2D1Q68D10 685 aaPredicted RBP18.57■□□□□ 0.56
TNIP1-220ENST00000610535 SCFD2Q8WU76 684 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 CEP95Q96GE4 821 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 AIPL1Q9NZN9 384 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 SART1O43290 800 aaKnown RBP18.57■□□□□ 0.56
TNIP1-220ENST00000610535 CLSTN1O94985 981 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 KIF4AO95239 1232 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 TNNI2P48788 182 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 TMEM119Q4V9L6 283 aa18.57■□□□□ 0.56
TNIP1-220ENST00000610535 DDX20Q9UHI6 824 aaKnown RBP18.57■□□□□ 0.56
TNIP1-220ENST00000610535 GMNCA6NCL1 334 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 ODF2Q5BJF6 829 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 ARHGAP27Q6ZUM4 889 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 ZNF571Q7Z3V5 609 aaPredicted RBP18.56■□□□□ 0.56
TNIP1-220ENST00000610535 RAB34Q9BZG1 259 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 LRRC4CQ9HCJ2 640 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 KLC4Q9NSK0 619 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 CNOT8Q9UFF9 292 aaKnown RBP18.56■□□□□ 0.56
TNIP1-220ENST00000610535 ROBO3Q96MS0 1386 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 LAMB2P55268 1798 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 DCDC2CA8MYV0 355 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 E9PMD0 336 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 GNPATO15228 680 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 ITGA4P13612 1032 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 UBLCP1Q8WVY7 318 aaPredicted RBP18.56■□□□□ 0.56
TNIP1-220ENST00000610535 GANQ9H2C0 597 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 CXorf56Q9H5V9 222 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 SLC12A6Q9UHW9 1150 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 FBXL5Q9UKA1 691 aa18.56■□□□□ 0.56
TNIP1-220ENST00000610535 SLC9A1P19634 815 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 USP11P51784 963 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 DDR1Q08345 913 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 UBE2SQ16763 222 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 ANKRD2Q9GZV1 360 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 AMACRQ9UHK6 382 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 BAG3O95817 575 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 SMTNP53814 917 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 KCNH2Q12809 1159 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 ADAM9Q13443 819 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 LRIG3Q6UXM1 1119 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 IRF2BP2Q7Z5L9 587 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 HAS1Q92839 578 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
TNIP1-220ENST00000610535 SLC40A1Q9NP59 571 aa18.55■□□□□ 0.56
TNIP1-220ENST00000610535 NOVA2Q9UNW9 492 aaKnown RBP18.55■□□□□ 0.56
TNIP1-220ENST00000610535 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
TNIP1-220ENST00000610535 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 DNM1LO00429 736 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 DAPK3O43293 454 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 RASSF9O75901 435 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 EPS15P42566 896 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 ADCY7P51828 1080 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 HERC4Q5GLZ8 1057 aaPredicted RBP18.54■□□□□ 0.56
TNIP1-220ENST00000610535 ARFGAP2Q8N6H7 521 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 NEDD1Q8NHV4 660 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 SCFD1Q8WVM8 642 aa18.54■□□□□ 0.56
TNIP1-220ENST00000610535 ZKSCAN4Q969J2 545 aaPredicted RBP18.54■□□□□ 0.56
TNIP1-220ENST00000610535 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms