RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	GSTO1	P78417	241 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HDLBP	Q00341	1268 aa	Known RBP	12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	STK4	Q13043	487 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZCWPW2	Q504Y3	356 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SOGA3	Q5TF21	947 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	KRT79	Q5XKE5	535 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MFSD5	Q6N075	450 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TLDC1	Q6P9B6	456 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PIGW	Q7Z7B1	504 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCDC65	Q8IXS2	484 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCDC82	Q8N4S0	544 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	IFT81	Q8WYA0	676 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MTMR8	Q96EF0	704 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	KRT12	Q99456	494 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZKSCAN3	Q9BRR0	538 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MLXIP	Q9HAP2	919 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	DUSP10	Q9Y6W6	482 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PFAS	O15067	1338 aa		12.84	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MIF4GD	A9UHW6	222 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SLC16A3	O15427	465 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	ADAMTS2	O95450	1211 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TFRC	P02786	760 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	ATP1A2	P50993	1020 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	RASSF7	Q02833	373 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	KLHL30	Q0D2K2	578 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CCDC15	Q0P6D6	951 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	NFIL3	Q16649	462 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SMYD5	Q6GMV2	418 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TMC3	Q7Z5M5	1100 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TRIM59	Q8IWR1	403 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	GSPT2	Q8IYD1	628 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	ARMC2	Q8NEN0	867 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	HVCN1	Q96D96	273 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	GDAP1L1	Q96MZ0	367 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	XPO6	Q96QU8	1125 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PABPC3	Q9H361	631 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SEMA6B	Q9H3T3	888 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	MTRF1L	Q9UGC7	380 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	ZNF652	Q9Y2D9	606 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	LEMD3	Q9Y2U8	911 aa		12.83	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PALM3	A6NDB9	673 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TSPY2	A6NKD2	308 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	UBE2Q2L	H0YL09	131 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	STXBP3	O00186	592 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	NDC80	O14777	642 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CETN3	O15182	167 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	RAD51C	O43502	376 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PRKAB2	O43741	272 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CYP19A1	P11511	503 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	FER	P16591	822 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	LMNB1	P20700	586 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	DRD4	P21917	467 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	RPL13	P26373	211 aa	Known RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	GBP2	P32456	591 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SLC7A5	Q01650	507 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	MKRN4P	Q13434	485 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TMEM119	Q4V9L6	283 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	LRCH2	Q5VUJ6	765 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CLEC4G	Q6UXB4	293 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	KRT26	Q7Z3Y9	468 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	LRRC57	Q8N9N7	239 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CCDC63	Q8NA47	563 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	KIAA0895	Q8NCT3	520 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PNMA1	Q8ND90	353 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	NKX2-3	Q8TAU0	364 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	NEK9	Q8TD19	979 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	RAD54L	Q92698	747 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	FMO2	Q99518	471 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TXLNGY	Q9BZA5	131 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	OSBPL7	Q9BZF2	842 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	ANKRD2	Q9GZV1	360 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PLEKHA4	Q9H4M7	779 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	HAUS2	Q9NVX0	235 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	BSDC1	Q9NW68	430 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SEC63	Q9UGP8	760 aa	Known RBP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	KIF13B	Q9NQT8	1826 aa		12.82	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CACNA1S	Q13698	1873 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236		F8VZ95	297 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	RTN2	O75298	545 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PRDM1	O75626	825 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	H2AFZ	P0C0S5	128 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	MAN1A1	P33908	653 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	EPS15	P42566	896 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SLC1A4	P43007	532 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	MATR3	P43243	847 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	CLNS1A	P54105	237 aa	Known RBP	12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	PTEN	P60484	403 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SF3B3	Q15393	1217 aa	Known RBP	12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	EZH2	Q15910	746 aa	Known RBP	12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TXNRD1	Q16881	649 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	C11orf91	Q3C1V1	193 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	KCTD16	Q68DU8	428 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	MOXD1	Q6UVY6	613 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	TOM1L2	Q6ZVM7	507 aa		12.81	□□□□□ -0.36
U2AF1L4-221	ENST00000601236	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms