RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CCSAPQ6IQ19 270 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 ZNF746Q6NUN9 644 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 SPC25Q9HBM1 224 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 PCDHA12Q9UN75 941 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 ATP6V1DQ9Y5K8 247 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 POTEMA6NI47 508 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 NOP56O00567 594 aaKnown RBP22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 ATG7O95352 703 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 YEATS4O95619 227 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 HOXD8P13378 290 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 STK38Q15208 465 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 GNASQ5JWF2 1037 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 SEPT1Q8WYJ6 367 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 TNPO1Q92973 898 aaKnown RBP22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 PCYT2Q99447 389 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 TMEM106CQ9BVX2 250 aa22.56■■□□□ 1.2
SHKBP1-222ENST00000600320 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 TCF7P36402 384 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 CPT1AP50416 773 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 FXR2P51116 673 aaKnown RBP eCLIP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 KRT85P78386 507 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 UTP14CQ5TAP6 766 aaKnown RBP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 ARL6IP4Q66PJ3 421 aaKnown RBP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 NCAPH2Q6IBW4 605 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 ABHD15Q6UXT9 468 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 DTHD1Q6ZMT9 781 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 MIER3Q7Z3K6 550 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 RNF180Q86T96 592 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 TCEAL9Q9UHQ7 104 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 FBXO2Q9UK22 296 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 CFAP45Q9UL16 551 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 MORC2Q9Y6X9 1032 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 TCHHQ07283 1943 aa22.55■■□□□ 1.2
SHKBP1-222ENST00000600320 VWA3AA6NCI4 1184 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 CCDC85CA6NKD9 419 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 WDR64B1ANS9 1081 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 TFRCP02786 760 aaKnown RBP22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 MYL3P08590 195 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 SUPT20HL2P0C7V6 817 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 MNX1P50219 401 aaPredicted RBP22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 KCNA10Q16322 511 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 TRIM50Q86XT4 487 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 ARRDC4Q8NCT1 418 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 DISC1Q9NRI5 854 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 RCOR1Q9UKL0 485 aa22.54■■□□□ 1.2
SHKBP1-222ENST00000600320 IGKV6D-21A0A0A0MT36 114 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 SPTLC2O15270 562 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 LGALS2P05162 132 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 ZNF286BP0CG31 522 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 JAK3P52333 1124 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 TMEM266Q2M3C6 531 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 CCDC60Q8IWA6 550 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 SMAP1Q8IYB5 467 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 LEO1Q8WVC0 666 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 GDPD2Q9HCC8 539 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 PCDHA10Q9Y5I2 948 aa22.53■■□□□ 1.2
SHKBP1-222ENST00000600320 PP2D1A8MPX8 630 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 PPFIA4O75335 1185 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 LGR5O75473 907 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 ASGR1P07306 291 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 SFNP31947 248 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 PURAQ00577 322 aaKnown RBP22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 EPHA7Q15375 998 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 DGKDQ16760 1214 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 BRDTQ58F21 947 aaPredicted RBP22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 MIS18BP1Q6P0N0 1132 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 IGSF22Q8N9C0 903 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 RDM1Q8NG50 284 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 CLIC6Q96NY7 704 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 C16orf70Q9BSU1 422 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 SAMM50Q9Y512 469 aa22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 SRPRBQ9Y5M8 271 aaKnown RBP22.52■■□□□ 1.2
SHKBP1-222ENST00000600320 DNM1LO00429 736 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 PPP6R2O75170 966 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 ACLYP53396 1101 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 UGCGQ16739 394 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 SWSAP1Q6NVH7 229 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 PCSK9Q8NBP7 692 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 KAT2BQ92831 832 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 FERMT2Q96AC1 680 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 TSEN34Q9BSV6 310 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 GABBR1Q9UBS5 961 aa22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 KIAA0100Q14667 2235 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-222ENST00000600320 ZEB2O60315 1214 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 PSAPP07602 524 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 CDC25AP30304 524 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 KRI1Q8N9T8 703 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 DIS3LQ8TF46 1054 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 DYDC2Q96IM9 177 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 SPATA32Q96LK8 384 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 EIF2AK1Q9BQI3 630 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 CSRNP2Q9H175 543 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 RGL1Q9NZL6 768 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 PHF24Q9UPV7 400 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 EMSYQ7Z589 1322 aa22.5■■□□□ 1.19
SHKBP1-222ENST00000600320 KBTBD13C9JR72 458 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 BACH1O14867 736 aa22.49■■□□□ 1.19
SHKBP1-222ENST00000600320 KPNA6O60684 536 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms