RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 LIFRP42702 1097 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 USP17L6PQ6QN14 398 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 NLRX1Q86UT6 975 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 TRIM50Q86XT4 487 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 GIMAP8Q8ND71 665 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 PIBF1Q8WXW3 757 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 APBB2Q92870 758 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 KCNB2Q92953 911 aa20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 UBE2ZQ9H832 354 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-203ENST00000594298 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 CTSHP09668 335 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 GNAQP50148 359 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 LEXMQ3ZCV2 418 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 DHX32Q7L7V1 743 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 RPAINQ86UA6 219 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 RASEFQ8IZ41 740 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 LMBR1Q8WVP7 490 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 MRPL38Q96DV4 380 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 YME1L1Q96TA2 773 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 OSBPL7Q9BZF2 842 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 TELO2Q9Y4R8 837 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 NRCAMQ92823 1304 aa20.15■□□□□ 0.82
SHKBP1-203ENST00000594298 SIP14410 1827 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 SH2B2O14492 632 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 PTPROQ16827 1216 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 EPC2Q52LR7 807 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 GPRASP2Q96D09 838 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 CDHR1Q96JP9 859 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 MYL10Q9BUA6 226 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 EPHX3Q9H6B9 360 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 BDP1A6H8Y1 2624 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 NCOR1O75376 2440 aa20.14■□□□□ 0.81
SHKBP1-203ENST00000594298 CALM1P0DP23 149 aa20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 CALM2P0DP24 149 aa20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 CALM3P0DP25 149 aa20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 PSMA5P28066 241 aa20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 ARHGAP4P98171 946 aa20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 UTP14CQ5TAP6 766 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 IFIH1Q9BYX4 1025 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-203ENST00000594298 H3BNC9 293 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 KCNA2P16389 499 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 TCF7P36402 384 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 PLA2G5P39877 138 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 TAF2Q6P1X5 1199 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 SRBD1Q8N5C6 995 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 SNX14Q9Y5W7 946 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 MICAL3Q7RTP6 2002 aa20.12■□□□□ 0.81
SHKBP1-203ENST00000594298 ATP9AO75110 1047 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 PLEKHA8P1O95397 391 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 CHRNA1P02708 482 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 ITGB5P18084 799 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 FGD1P98174 961 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 EXOSC10Q01780 885 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 SP4Q02446 784 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 ADCK5Q3MIX3 580 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 TIGD5Q53EQ6 642 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 SEPT1Q8WYJ6 367 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 LRFN3Q9BTN0 628 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 EHMT1Q9H9B1 1298 aa20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 ARIH1Q9Y4X5 557 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-203ENST00000594298 BAZ2BQ9UIF8 2168 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 UPP2O95045 317 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 KCNA5P22460 613 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 MGAT3Q09327 533 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 TMEM31Q5JXX7 168 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 KHSRPQ92945 711 aaKnown RBP eCLIP20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 JAKMIP1Q96N16 626 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 CD320Q9NPF0 282 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 ERAP1Q9NZ08 941 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 UBIAD1Q9Y5Z9 338 aa20.1■□□□□ 0.81
SHKBP1-203ENST00000594298 GSTTP1A0A1W2PQM5 241 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 MBLAC1A4D2B0 266 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 PI4K2BG5E9Z4 385 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 MAFGO15525 162 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 GPR37L1O60883 481 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 GPM6BQ13491 265 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 COL19A1Q14993 1142 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 PUS10Q3MIT2 529 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 RUFY4Q6ZNE9 571 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 FAM178BQ8IXR5 827 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 BANK1Q8NDB2 785 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 NEK9Q8TD19 979 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 IL17RAQ96F46 866 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 LRRC2Q9BYS8 371 aa20.09■□□□□ 0.81
SHKBP1-203ENST00000594298 C5orf67F2Z3F1 127 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 PPFIA1Q13136 1202 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 MTMR1Q13613 665 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 RSPH3Q86UC2 560 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 CMTR1Q8N1G2 835 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 FAM122AQ96E09 287 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 SMARCAD1Q9H4L7 1026 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 JADE2Q9NQC1 790 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms