RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SARM1Q6SZW1 724 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 UNC13DQ70J99 1090 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 SMYD4Q8IYR2 804 aaPredicted RBP12.74□□□□□ -0.37
SMAD4-205ENST00000588745 PTPN18Q99952 460 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
SMAD4-205ENST00000588745 TCEAL9Q9UHQ7 104 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 DNM3Q9UQ16 869 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 GDAQ9Y2T3 454 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 NFASCO94856 1347 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 MANSC4A6NHS7 340 aaPredicted RBP12.73□□□□□ -0.37
SMAD4-205ENST00000588745 KIF3CO14782 793 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 ATP9AO75110 1047 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
SMAD4-205ENST00000588745 EYA4O95677 639 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 SLC10A3P09131 477 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 FCER1AP12319 257 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 KCNA2P16389 499 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 JAK3P52333 1124 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 DYMQ7RTS9 669 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
SMAD4-205ENST00000588745 ENOX1Q8TC92 643 aaKnown RBP12.73□□□□□ -0.37
SMAD4-205ENST00000588745 DDX12PQ92771 950 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 FGD4Q96M96 766 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 MPHOSPH6Q99547 160 aaKnown RBP12.73□□□□□ -0.37
SMAD4-205ENST00000588745 LXNQ9BS40 222 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 PORCNQ9H237 461 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 EFCC1Q9HA90 598 aa12.73□□□□□ -0.37
SMAD4-205ENST00000588745 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
SMAD4-205ENST00000588745 DNAJC25-GNG10A0A024R161 153 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 WDR64B1ANS9 1081 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 B4DLN1 442 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 SPATA31C2B4DYI2 1134 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 PGK2P07205 417 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 CYP11B2P19099 503 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 SFNP31947 248 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 ICAM3P32942 547 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 PSMC6P62333 389 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 KLHL10Q6JEL2 608 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 ZNF746Q6NUN9 644 aaPredicted RBP12.72□□□□□ -0.37
SMAD4-205ENST00000588745 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 TRMT44Q8IYL2 757 aaKnown RBP12.72□□□□□ -0.37
SMAD4-205ENST00000588745 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
SMAD4-205ENST00000588745 SMC1BQ8NDV3 1235 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 RDM1Q8NG50 284 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 HSD3B7Q9H2F3 369 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 ZCCHC17Q9NP64 241 aaKnown RBP12.72□□□□□ -0.37
SMAD4-205ENST00000588745 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 TLL2Q9Y6L7 1015 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 ZNF236Q9UL36 1845 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
SMAD4-205ENST00000588745 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 CCNE2O96020 404 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.37
SMAD4-205ENST00000588745 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
SMAD4-205ENST00000588745 IDEP14735 1019 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 PPP1R2P41236 205 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 ZNF75DP51815 510 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 EHHADHQ08426 723 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 FSTL1Q12841 308 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 PAK1Q13153 545 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 STIM1Q13586 685 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
SMAD4-205ENST00000588745 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 ADSSL1Q8N142 457 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 BANK1Q8NDB2 785 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 NACC1Q96RE7 527 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 MED15Q96RN5 788 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 SENP7Q9BQF6 1050 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 TRIM5Q9C035 493 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.37
SMAD4-205ENST00000588745 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.37
SMAD4-205ENST00000588745 RWDD2AQ9UIY3 292 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 NFE2L3Q9Y4A8 694 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 SAMM50Q9Y512 469 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 PLXNA1Q9UIW2 1896 aa12.71□□□□□ -0.37
SMAD4-205ENST00000588745 FRMD3A2A2Y4 597 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMAD4-205ENST00000588745 LYPLA2O95372 231 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 PRCPP42785 496 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 QARSP47897 775 aaKnown RBP12.7□□□□□ -0.38
SMAD4-205ENST00000588745 STX17P56962 302 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 STK4Q13043 487 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 COASYQ13057 564 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 SMAP1Q8IYB5 467 aaPredicted RBP12.7□□□□□ -0.38
SMAD4-205ENST00000588745 ABRAQ8N0Z2 381 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 PIGOQ8TEQ8 1089 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 NELFBQ8WX92 580 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
SMAD4-205ENST00000588745 ZNFX1Q9P2E3 1918 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms