RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 DPPA5A6NC42 116 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 E7ENQ6 273 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-207ENST00000586588 MSH2P43246 934 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 BNIP1Q12981 228 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 DDX42Q86XP3 938 aaKnown RBP eCLIP14.34□□□□□ -0.11
DNMT1-207ENST00000586588 ABCF3Q9NUQ8 709 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 ADAM22Q9P0K1 906 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
DNMT1-207ENST00000586588 FLT3P36888 993 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 COPS2P61201 443 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 LAMB3Q13751 1172 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 PDIA5Q14554 519 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.11
DNMT1-207ENST00000586588 KLHL29Q96CT2 875 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 PAIP2Q9BPZ3 127 aaKnown RBP14.33□□□□□ -0.11
DNMT1-207ENST00000586588 ZKSCAN3Q9BRR0 538 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 TJP1Q07157 1748 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 AKAP11Q9UKA4 1901 aa14.33□□□□□ -0.11
DNMT1-207ENST00000586588 ZPR1O75312 459 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 OAS1P00973 400 aaKnown RBP14.33□□□□□ -0.12
DNMT1-207ENST00000586588 DHX9Q08211 1270 aaKnown RBP14.33□□□□□ -0.12
DNMT1-207ENST00000586588 PSMD2Q13200 908 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 GNPTABQ3T906 1256 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 FAM167BQ9BTA0 163 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 SLITRK6Q9H5Y7 841 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 MMRN2Q9H8L6 949 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 MAGEF1Q9HAY2 307 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 PIH1D3Q9NQM4 214 aaKnown RBP14.33□□□□□ -0.12
DNMT1-207ENST00000586588 FAM114A2Q9NRY5 505 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 TOGARAM1Q9Y4F4 1720 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 SPDYE3A6NKU9 549 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 SNX3O60493 162 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 IDH1O75874 414 aaKnown RBP14.33□□□□□ -0.12
DNMT1-207ENST00000586588 NUDT17P0C025 328 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 PDE6CP51160 858 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 RPS6KA1Q15418 735 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 LMNTD2Q8IXW0 634 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-207ENST00000586588 EZH1Q92800 747 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-207ENST00000586588 TXLNGYQ9BZA5 131 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 ADAM7Q9H2U9 754 aa14.33□□□□□ -0.12
DNMT1-207ENST00000586588 MYH2Q9UKX2 1941 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 BTNL10A8MVZ5 291 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 KRT16P08779 473 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 KLRC1P26715 233 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 MCM7P33993 719 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 RNASE9P60153 205 aaKnown RBP14.32□□□□□ -0.12
DNMT1-207ENST00000586588 MAN2A1Q16706 1144 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 ASRGL1Q7L266 308 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 PLCD4Q9BRC7 762 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 CUEDC2Q9H467 287 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-207ENST00000586588 PRDM1O75626 825 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 SERPING1P05155 500 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 DNA2P51530 1060 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 ANO7Q6IWH7 933 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 CROCCP2Q86T23 111 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 KLHL23Q8NBE8 558 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 TEKT4Q8WW24 435 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 ANKS1AQ92625 1134 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 DCAF5Q96JK2 942 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 RNF41Q9H4P4 317 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-207ENST00000586588 INTS9Q9NV88 658 aaKnown RBP14.32□□□□□ -0.12
DNMT1-207ENST00000586588 BTG4Q9NY30 223 aa14.32□□□□□ -0.12
DNMT1-207ENST00000586588 MXRA7P84157 204 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 APBB1IPQ7Z5R6 666 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 DZIP3Q86Y13 1208 aaKnown RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 EEF2KMTQ96G04 330 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 CCSER1Q9C0I3 900 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 CTNNAL1Q9UBT7 734 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 USP15Q9Y4E8 981 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 PHLPP1O60346 1717 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 CCDC169A6NNP5 214 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 KCNK3O14649 394 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 DAPK3O43293 454 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 PCCAP05165 728 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 GNAZP19086 355 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 SKIV2L2P42285 1042 aaKnown RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 USP11P51784 963 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 SEC23AQ15436 765 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 TTC5Q8N0Z6 440 aa14.31□□□□□ -0.12
DNMT1-207ENST00000586588 PACSIN2Q9UNF0 486 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 COL14A1Q05707 1796 aaKnown RBP14.31□□□□□ -0.12
DNMT1-207ENST00000586588 PGRMC1O00264 195 aaKnown RBP14.3□□□□□ -0.12
DNMT1-207ENST00000586588 O00370 1275 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 HIP1RO75146 1068 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 KIF4AO95239 1232 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 ITGA6P23229 1130 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 ALDH3A1P30838 453 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 GBP1P32455 592 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
DNMT1-207ENST00000586588 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 TMC4Q7Z404 712 aa14.3□□□□□ -0.12
DNMT1-207ENST00000586588 BICD1Q96G01 975 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms