RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CHMLP26374 656 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ADORA1P30542 326 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 THPOP40225 353 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ARL4AP40617 200 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 LRMPQ12912 555 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ALCAMQ13740 583 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ASIC2Q16515 512 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF667Q5HYK9 610 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 BSPRYQ5W0U4 402 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 KRT40Q6A162 431 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 DGKHQ86XP1 1220 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RHPN2Q8IUC4 686 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 DCP1BQ8IZD4 617 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RAB42Q8N4Z0 105 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CSGALNACT1Q8TDX6 532 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ZC3H15Q8WU90 426 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 MAIP1Q8WWC4 291 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ATRIPQ8WXE1 791 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 DPF2Q92785 391 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GPKOWQ92917 476 aaPredicted RBP eCLIP3.19□□□□□ -1.92e-6■■■□□ 15.3
SMCHD1-203ENST00000577880 ACSF2Q96CM8 615 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 DYNLL2Q96FJ2 89 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ACAP3Q96P50 834 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 MSTO1Q9BUK6 570 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 THG1LQ9NWX6 298 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PCDHB8Q9UN66 801 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CAMTA1Q9Y6Y1 1673 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GLTPD2A6NH11 291 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RSPH10B2B2RC85 870 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GPR182O15218 404 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CUTAO60888 179 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RNASEH1O60930 286 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ZWINTO95229 277 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 APOEP02649 317 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RSPH10BP0C881 870 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GYS1P13807 737 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 AKR1A1P14550 325 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 RPS6KB1P23443 525 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PRDX5P30044 214 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 OR1G1P47890 313 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 DPYDQ12882 1025 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SF3B3Q15393 1217 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF568Q3ZCX4 644 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PREPLQ4J6C6 727 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ANO1Q5XXA6 986 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 NT5DC4Q86YG4 428 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PPM1KQ8N3J5 372 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 TTC39CQ8N584 583 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SH3RF3Q8TEJ3 882 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 STAMQ92783 540 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ASIC4Q96FT7 647 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 EMILIN2Q9BXX0 1053 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 STMN4Q9H169 189 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PPANQ9NQ55 473 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SLC38A7Q9NVC3 462 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ARMCX3Q9UH62 379 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ANGPTL3Q9Y5C1 460 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PNPLA6Q8IY17 1366 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PLXNC1O60486 1568 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ELP1O95163 1332 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 E7EWF7 191 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 SLC27A2O14975 620 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 HOXA13P31271 388 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GTF2F1P35269 517 aaKnown RBP eCLIP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 STAT1P42224 750 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 KPNA1P52294 538 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 DRP2Q13474 957 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 IKBKEQ14164 716 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 STARD3Q14849 445 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 NKX1-1Q15270 411 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PROSER3Q2NL68 480 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 NBPF9Q3BBW0 867 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ARMC6Q6NXE6 501 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GIMAP6Q6P9H5 292 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 TMCO3Q6UWJ1 677 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CCDC84Q86UT8 332 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 MRPS31Q92665 395 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CDCA5Q96FF9 252 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ABHD8Q96I13 439 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 XPNPEP3Q9NQH7 507 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PANK4Q9NVE7 773 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 KCNJ14Q9UNX9 436 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 KIAA1024Q9UPX6 916 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PCDHB4Q9Y5E5 795 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 NCAPD2Q15021 1401 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CDC42BPGQ6DT37 1551 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 H7C1W4 665 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 H7C4K7 107 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 XYLBO75191 536 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 URI1O94763 535 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PDE6CP51160 858 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 FBXW4P57775 412 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 UBE2HP62256 183 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 IRX5P78411 483 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 KIF23Q02241 960 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ELAVL2Q12926 359 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 MAP7Q14244 749 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 FAM26FQ5R3K3 315 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms