RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 CCDC69A6NI79 296 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 CAND2O75155 1236 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 CTSHP09668 335 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 USP17L6PQ6QN14 398 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 RUFY3Q7L099 469 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 TRIM50Q86XT4 487 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 FBXO22Q8NEZ5 403 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 SP7Q8TDD2 431 aaPredicted RBP17■□□□□ 0.31
NPLOC4-207ENST00000572346 MAP3K14Q99558 947 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 SETD4Q9NVD3 440 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 TELO2Q9Y4R8 837 aa17■□□□□ 0.31
NPLOC4-207ENST00000572346 SH2B2O14492 632 aaPredicted RBP16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 MEIS2O14770 477 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 EXOSC10Q01780 885 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 PCNX4Q63HM2 1172 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 Q6ZUG5 572 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 ZNF654Q8IZM8 581 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 CTCFLQ8NI51 663 aaPredicted RBP16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 SEPT8Q92599 483 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 CUL5Q93034 780 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 RRP36Q96EU6 259 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 MYL10Q9BUA6 226 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
NPLOC4-207ENST00000572346 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 DDAH1O94760 285 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 GNAT1P11488 350 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 KIF5BP33176 963 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 LIFRP42702 1097 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 ADAM17P78536 824 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 SP4Q02446 784 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 UTP14CQ5TAP6 766 aaKnown RBP16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 TOP1MTQ969P6 601 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 SENP7Q9BQF6 1050 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 EPHX3Q9H6B9 360 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 UBE2ZQ9H832 354 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 ZNF215Q9UL58 517 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 NAP1L2Q9ULW6 460 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-207ENST00000572346 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 SEC63Q9UGP8 760 aaKnown RBP16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 SLC12A7Q9Y666 1083 aa16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 NLRC5Q86WI3 1866 aa16.97■□□□□ 0.31
NPLOC4-207ENST00000572346 UPP2O95045 317 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 EPC2Q52LR7 807 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 NLRX1Q86UT6 975 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 APBB2Q92870 758 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 KHSRPQ92945 711 aaKnown RBP eCLIP16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 MRPL38Q96DV4 380 aaKnown RBP16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 SAMD11Q96NU1 681 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 YME1L1Q96TA2 773 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 LZTS2Q9BRK4 669 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 COL4A6Q14031 1691 aa16.96■□□□□ 0.31
NPLOC4-207ENST00000572346 NRCAMQ92823 1304 aa16.96■□□□□ 0.3
NPLOC4-207ENST00000572346 ATP9AO75110 1047 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 TCF7P36402 384 aaPredicted RBP16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 GNAQP50148 359 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 NEK4P51957 841 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 LEXMQ3ZCV2 418 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 CMTR1Q8N1G2 835 aaKnown RBP16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 GIMAP8Q8ND71 665 aaPredicted RBP16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 BRF1Q92994 677 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 GPRASP2Q96D09 838 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 IFIH1Q9BYX4 1025 aaKnown RBP16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 CD320Q9NPF0 282 aa16.95■□□□□ 0.3
NPLOC4-207ENST00000572346 KLF18A0A0U1RQI7 1052 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 H3BNC9 293 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 CALM1P0DP23 149 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 CALM2P0DP24 149 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 CALM3P0DP25 149 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 KCNA2P16389 499 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 RXRAP19793 462 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 KCNA5P22460 613 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 PTPROQ16827 1216 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 SGMS1Q86VZ5 419 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 TMEM192Q8IY95 271 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 IL17RAQ96F46 866 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 PSTPIP2Q9H939 334 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 RALGAPA2Q2PPJ7 1873 aa16.94■□□□□ 0.3
NPLOC4-207ENST00000572346 GSTTP1A0A1W2PQM5 241 aa16.93■□□□□ 0.3
NPLOC4-207ENST00000572346 ZBTB43O43298 467 aa16.93■□□□□ 0.3
NPLOC4-207ENST00000572346 CHRNA1P02708 482 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms