RNA–Protein interactions for RNA: ENST00000556580.4

NGDN-210, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-210ENST00000556580 TMPRSS15P98073 1019 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 NFIXQ14938 502 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 BRD3Q15059 726 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 SEPT7Q16181 437 aaKnown RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 TWISTNBQ3B726 338 aaPredicted RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 EXOSC6Q5RKV6 272 aaKnown RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 NXNQ6DKJ4 435 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 KIF6Q6ZMV9 814 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 C1orf229Q6ZS94 237 aaPredicted RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 MAMDC2Q7Z304 686 aaPredicted RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 FGD2Q7Z6J4 655 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 TCEAL8Q8IYN2 117 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 SAMD3Q8N6K7 520 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 TSPYL6Q8N831 410 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 GALNT6Q8NCL4 622 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 PI4K2BQ8TCG2 481 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 DPH2Q9BQC3 489 aaPredicted RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 CCDC8Q9H0W5 538 aaPredicted RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 ATXN3LQ9H3M9 355 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 FBRSQ9HAH7 460 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 CRIM1Q9NZV1 1036 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
NGDN-210ENST00000556580 APOBEC2Q9Y235 224 aaKnown RBP7.32□□□□□ -1.24
NGDN-210ENST00000556580 LAMB4A4D0S4 1761 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 POLRMTO00411 1230 aaKnown RBP7.31□□□□□ -1.24
NGDN-210ENST00000556580 TMPRSS2O15393 492 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 DLX3O60479 287 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 VAMP4O75379 141 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 PYGMP11217 842 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 NTF4P34130 210 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 SCNN1BP51168 640 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 RNF4P78317 190 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 EXOSC9Q06265 439 aaKnown RBP7.31□□□□□ -1.24
NGDN-210ENST00000556580 MAP4K2Q12851 820 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 NKG7Q16617 165 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 FAM102BQ5T8I3 360 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 SYDE2Q5VT97 1194 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 COPS6Q7L5N1 327 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 C7orf61Q8IZ16 206 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
NGDN-210ENST00000556580 ARHGEF39Q8N4T4 335 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 CNTD1Q8N815 330 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 BTN2A2Q8WVV5 523 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 SCLYQ96I15 445 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 ZNF512BQ96KM6 892 aaPredicted RBP7.31□□□□□ -1.24
NGDN-210ENST00000556580 SYT17Q9BSW7 474 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 STK31Q9BXU1 1019 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.31□□□□□ -1.24
NGDN-210ENST00000556580 TRHDEQ9UKU6 1024 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 STARD13Q9Y3M8 1113 aa7.31□□□□□ -1.24
NGDN-210ENST00000556580 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 DLGAP3O95886 979 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 CST3P01034 146 aaPredicted RBP7.3□□□□□ -1.24
NGDN-210ENST00000556580 SERPINB2P05120 415 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 CT47B1P0C2W7 299 aaPredicted RBP7.3□□□□□ -1.24
NGDN-210ENST00000556580 BPIP17213 487 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 CD68P34810 354 aaPredicted RBP7.3□□□□□ -1.24
NGDN-210ENST00000556580 TGFB2P61812 414 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 DDR1Q08345 913 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
NGDN-210ENST00000556580 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 MLC1Q15049 377 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 PROSER3Q2NL68 480 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 HSP90AB3PQ58FF7 597 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 PRAMEF13Q5VWM6 474 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 TBC1D9BQ66K14 1250 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
NGDN-210ENST00000556580 TTLL7Q6ZT98 887 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 GOLGA6L1Q8N7Z2 621 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 PLBD2Q8NHP8 589 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 XAGE3Q8WTP9 111 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 MPHOSPH6Q99547 160 aaKnown RBP7.3□□□□□ -1.24
NGDN-210ENST00000556580 ZNF700Q9H0M5 742 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 GP6Q9HCN6 339 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 ZNF180Q9UJW8 692 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 PPP1R9AQ9ULJ8 1098 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 C4AP0C0L4 1744 aa7.3□□□□□ -1.24
NGDN-210ENST00000556580 TCRBV16S1A1N1A0A5B0 115 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 NEMP1O14524 444 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 TM4SF5O14894 197 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 RFPL1O75677 317 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 KCNH1O95259 989 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 DDX58O95786 925 aaKnown RBP7.29□□□□□ -1.24
NGDN-210ENST00000556580 ALBP02768 609 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 ANXA1P04083 346 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 ITGB2P05107 769 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 NAT1P18440 290 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 HOXC12P31275 282 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 KCNJ6P48051 423 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 GFRA1P56159 465 aa7.29□□□□□ -1.24
NGDN-210ENST00000556580 SNRPNP63162 240 aaKnown RBP7.29□□□□□ -1.24
NGDN-210ENST00000556580 AIMP1Q12904 312 aaKnown RBP7.29□□□□□ -1.24
NGDN-210ENST00000556580 SLBPQ14493 270 aaKnown RBP eCLIP7.29□□□□□ -1.24
NGDN-210ENST00000556580 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
NGDN-210ENST00000556580 HLFQ16534 295 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms