RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ERVV-1B6SEH8 477 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 ADCY3O60266 1144 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 LEFTY1O75610 366 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 NPR1P16066 1061 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 L1CAMP32004 1257 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 EPHX2P34913 555 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 PDE6BP35913 854 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CHRNA4P43681 627 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CTCFP49711 727 aaPredicted RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 EIF4A1P60842 406 aaKnown RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 POU4F1Q01851 419 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CXCL9Q07325 125 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 PPP2R5DQ14738 602 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 PTPROQ16827 1216 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CLEC16AQ2KHT3 1053 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 PROSER3Q2NL68 480 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 DEFB115Q30KQ5 88 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SUSD4Q5VX71 490 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 DUSP27Q5VZP5 1158 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 NSMFQ6X4W1 530 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 TTLL7Q6ZT98 887 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 KIAA0907Q7Z7F0 614 aaPredicted RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 ZAR1Q86SH2 424 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CD163Q86VB7 1156 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF227Q86WZ6 799 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SCUBE1Q8IWY4 988 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 GPC2Q8N158 579 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 ARHGEF39Q8N4T4 335 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 ADCY4Q8NFM4 1077 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SYTL5Q8TDW5 730 aaPredicted RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 BRF1Q92994 677 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CCDC140Q96MF4 163 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 CRAMP1Q96RY5 1269 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 PRDM14Q9GZV8 571 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 NOL6Q9H6R4 1146 aaKnown RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 IFT57Q9NWB7 429 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 GPRC5DQ9NZD1 345 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 APEX2Q9UBZ4 518 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 PLAAQ9Y263 795 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SF3B6Q9Y3B4 125 aaKnown RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 FHOD1Q9Y613 1164 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 RNF123Q5XPI4 1314 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 IRS2Q9Y4H2 1338 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 KIF20BQ96Q89 1820 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 RTL9Q8NET4 1388 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SPTBN5Q9NRC6 3674 aaKnown RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF609O15014 1411 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 DNAJC25-GNG10A0A024R161 153 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 hCG_2014768A0A024R1R8 64 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 HMX2A2RU54 273 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 WTIPA6NIX2 430 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 IGF2BP3O00425 579 aaKnown RBP eCLIP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 PLD2O14939 933 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 SHOXO15266 292 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 PRODHO43272 600 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 SIGLEC6O43699 453 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 HTATSF1O43719 755 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 LRRN2O75325 713 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 KCNH1O95259 989 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 CPP00450 1065 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 APPP05067 770 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 FGFR1P11362 822 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 ITIH2P19823 946 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 HOXC12P31275 282 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 MAP2K2P36507 400 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 IARSP41252 1262 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 NOP2P46087 812 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF445P59923 1031 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 ANAPC15P60006 121 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 SUMO1P63165 101 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 IGBP1P78318 339 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 AMPD2Q01433 879 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 NMIQ13287 307 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 GRB10Q13322 594 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 DCTN1Q14203 1278 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 FNDC3BQ53EP0 1204 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 C1orf141Q5JVX7 400 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 FAM209AQ5JX71 171 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 CWF19L1Q69YN2 538 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 CYP4F22Q6NT55 531 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 PRR23CQ6ZRP0 262 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 MORC1Q86VD1 984 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 TRIM59Q8IWR1 403 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 FBXL6Q8N531 539 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 FIBCD1Q8N539 461 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF513Q8N8E2 541 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 DTWD2Q8NBA8 298 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 PIWIL2Q8TC59 973 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 ENOX1Q8TC92 643 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 KISS1RQ969F8 398 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 MRGPRX3Q96LB0 322 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 Q96M66 194 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 METTL22Q9BUU2 404 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 SSBP4Q9BWG4 385 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 TEX13AQ9BXU3 409 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 BRINP2Q9C0B6 783 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 VPS33BQ9H267 617 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 TRIT1Q9H3H1 467 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 C7orf69Q9H7B7 122 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 ARHGEF4Q9NR80 690 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms