RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CPA4Q9UI42 421 aa9.13□□□□□ -0.95
DEPDC4-207ENST00000549249 SYCE3A1L190 88 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 KINO60870 393 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 PSMD10O75832 226 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 PGK2P07205 417 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 EDNRBP24530 442 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 CCND2P30279 289 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 TM4SF4P48230 202 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 ZNF445P59923 1031 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 SREBF2Q12772 1141 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 CAMK4Q16566 473 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 TMEM266Q2M3C6 531 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 VSIG10LQ86VR7 867 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 SLFN12Q8IYM2 578 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 DNERQ8NFT8 737 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 NSUN6Q8TEA1 469 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 ERCC4Q92889 916 aaPredicted RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 SLC5A5Q92911 643 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 DHX58Q96C10 678 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 AK8Q96MA6 479 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 FAM20AQ96MK3 541 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 TIGD1Q96MW7 591 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 INPP4AQ96PE3 977 aaPredicted RBP9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 NUDT12Q9BQG2 462 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 FUCA2Q9BTY2 467 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 PANK2Q9BZ23 570 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 JADE2Q9NQC1 790 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 VAV3Q9UKW4 847 aa9.12□□□□□ -0.95
DEPDC4-207ENST00000549249 C3orf80F5H4A9 247 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 EML1O00423 815 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 TLR2O60603 784 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 PLCG1P19174 1290 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 INHBEP58166 350 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 CCNA1P78396 465 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 MLLT1Q03111 559 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 GRB10Q13322 594 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 PDIA5Q14554 519 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 ECM1Q16610 540 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 WDR78Q5VTH9 848 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 PDXDC2PQ6P474 469 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 C17orf99Q6UX52 265 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 B3GNT9Q6UX72 402 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 SH3RF1Q7Z6J0 888 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 CABP7Q86V35 215 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 GAS2L3Q86XJ1 694 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 CKAP2LQ8IYA6 745 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 GRAMD1CQ8IYS0 662 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 TATDN2Q93075 761 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 PNMA5Q96PV4 448 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 MTRQ99707 1265 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 TNMDQ9H2S6 317 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 AGO4Q9HCK5 861 aaKnown RBP9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 DISC1Q9NRI5 854 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 KCNH7Q9NS40 1196 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 SAGE1Q9NXZ1 904 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 LRWD1Q9UFC0 647 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 PCDHA12Q9UN75 941 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 MYH9P35579 1960 aaKnown RBP9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 LOXHD1Q8IVV2 1947 aa9.11□□□□□ -0.95
DEPDC4-207ENST00000549249 IPO5O00410 1097 aaKnown RBP9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 DHX15O43143 795 aaKnown RBP9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 MARCH6O60337 910 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ATP9AO75110 1047 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 COBLO75128 1261 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 FCER1AP12319 257 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ADORA2AP29274 412 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 MDM2Q00987 491 aaPredicted RBP9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 CRHR2Q13324 411 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ITGB3BPQ13352 177 aaPredicted RBP9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 PPP2R5CQ13362 524 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 MTMR1Q13613 665 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 GRB14Q14449 540 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 KCTD2Q14681 263 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ZNF792Q3KQV3 632 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 TMEM119Q4V9L6 283 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 HYIQ5T013 277 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 LRCH2Q5VUJ6 765 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 NCAPH2Q6IBW4 605 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 OTOP1Q7RTM1 612 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 KCNK18Q7Z418 384 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 GPR142Q7Z601 462 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ABRAQ8N0Z2 381 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 CNNM3Q8NE01 707 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 MORC4Q8TE76 937 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 GPRASP2Q96D09 838 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 PLIN2Q99541 437 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ZNF577Q9BSK1 485 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 TEKT3Q9BXF9 490 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms