RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TOP1MTQ969P6 601 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
GABPB1-206ENST00000543881 FRMPD4Q14CM0 1322 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 WDFY4Q6ZS81 3184 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 UPP2O95045 317 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
GABPB1-206ENST00000543881 CCND2P30279 289 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 MCM5P33992 734 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 RAB11FIP4Q86YS3 637 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-206ENST00000543881 SEPT8Q92599 483 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 TMEM87BQ96K49 555 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 SPATA33Q96N06 139 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
GABPB1-206ENST00000543881 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
GABPB1-206ENST00000543881 MEIS2O14770 477 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 TGFB3P10600 412 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 KIF5BP33176 963 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 IRS1P35568 1242 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 BMP2KLQ5H9B9 411 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 NFXL1Q6ZNB6 911 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 ATP6V0A1Q93050 837 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
GABPB1-206ENST00000543881 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 C17orf102A2RUQ5 167 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 LTBRP36941 435 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 LIFRP42702 1097 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 COL4A6Q14031 1691 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-206ENST00000543881 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 MFSD14AQ96MC6 490 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-206ENST00000543881 C16orf70Q9BSU1 422 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 RTEL1Q9NZ71 1219 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 TELO2Q9Y4R8 837 aa13.67□□□□□ -0.22
GABPB1-206ENST00000543881 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-206ENST00000543881 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 NCK2O43639 380 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 ICAM3P32942 547 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 LZTS2Q9BRK4 669 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
GABPB1-206ENST00000543881 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
GABPB1-206ENST00000543881 H3BRB1 525 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 PIK3CDO00329 1044 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 TREHO43280 583 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 CTSHP09668 335 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 SMIM10L2AP0DMW4 78 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 SMIM10L2BP0DMW5 78 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 HOXC8P31273 242 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 CTNNB1P35222 781 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 GNAQP50148 359 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
GABPB1-206ENST00000543881 CLUL1Q15846 466 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 POP1Q99575 1024 aaKnown RBP13.65□□□□□ -0.22
GABPB1-206ENST00000543881 TUT1Q9H6E5 874 aaKnown RBP13.65□□□□□ -0.22
GABPB1-206ENST00000543881 SEC63Q9UGP8 760 aaKnown RBP13.65□□□□□ -0.22
GABPB1-206ENST00000543881 MUTYHQ9UIF7 546 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 C5orf42Q9H799 3197 aa13.65□□□□□ -0.22
GABPB1-206ENST00000543881 CAND2O75155 1236 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 STAM2O75886 525 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 CALM1P0DP23 149 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 CALM2P0DP24 149 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 CALM3P0DP25 149 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 DLX2Q07687 328 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-206ENST00000543881 HYAL1Q12794 435 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 ADCK5Q3MIX3 580 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 HERC4Q5GLZ8 1057 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-206ENST00000543881 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 FIBCD1Q8N539 461 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 FANCBQ8NB91 859 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 APBB2Q92870 758 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 DOCK5Q9H7D0 1870 aa13.64□□□□□ -0.23
GABPB1-206ENST00000543881 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 FIBPO43427 364 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms