RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZNF335Q9H4Z2 1342 aaPredicted RBP8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 SSU72P8A0A1W2PR75 194 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 BUB1BO60566 1050 aaPredicted RBP8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 LRRN2O75325 713 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 GBP1P32455 592 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 STX2P32856 288 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 IFNAR2P48551 515 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 VPS41P49754 854 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 LRCH2Q5VUJ6 765 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 ICE2Q659A1 982 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 TBC1D9BQ66K14 1250 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 ARMC9Q7Z3E5 817 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 CCDC127Q96BQ5 260 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 CD209Q9NNX6 404 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 RPS6KA4O75676 772 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 SASH3O75995 380 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 POLR2MP0CAP2 368 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 PDXDC1Q6P996 788 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 MMS22LQ6ZRQ5 1243 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 TRAPPC11Q7Z392 1133 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 RUNDC3BQ96NL0 473 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ERGIC2Q96RQ1 377 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 LACRTQ9GZZ8 138 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 NARFQ9UHQ1 456 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 PACSIN2Q9UNF0 486 aaPredicted RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 UBR1Q8IWV7 1749 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 CAMTA2O94983 1202 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 FGGP02679 453 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 CLTAP09496 248 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 EARS2Q5JPH6 523 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L6PQ6QN14 398 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 FAM196AQ6ZSG2 479 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 MIER3Q7Z3K6 550 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 CCDC197Q8NCU1 140 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 PPP1R14CQ8TAE6 165 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 MXD3Q9BW11 206 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ANO3Q9BYT9 981 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ANKZF1Q9H8Y5 726 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 INTS13Q9NVM9 706 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 THRAP3Q9Y2W1 955 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 H3BQF6 201 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 K7ENM7 598 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ZBTB5O15062 677 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 TRIM37O94972 964 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ATP2A2P16615 1042 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 KRT15P19012 456 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ALDH1B1P30837 517 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 KLK7P49862 253 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 CLNS1AP54105 237 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 EIF3BP55884 814 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 ABCB5Q2M3G0 1257 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 FBXO33Q7Z6M2 555 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 DNAJC7Q99615 494 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 RIOK1Q9BRS2 568 aaKnown RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 RAB21Q9UL25 225 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 USTQ9Y2C2 406 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 DUSP10Q9Y6W6 482 aa8.93□□□□□ -0.98
PRKAB1-207ENST00000542698 POTEB3A0JP26 581 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 MYMKA6NI61 221 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 LRRC10BA6NIK2 292 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 POTECB2RU33 542 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 MYCLP12524 364 aaPredicted RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 ADCY8P40145 1251 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 IRAK1P51617 712 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 PDXDC2PQ6P474 469 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 POTEBQ6S5H4 581 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 SPICE1Q8N0Z3 855 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 ZMYND12Q9H0C1 365 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 TAF1DQ9H5J8 278 aaPredicted RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 PARVGQ9HBI0 331 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 PASKQ96RG2 1323 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 SFI1A8K8P3 1242 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 NTSR2O95665 410 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 MYL7Q01449 175 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 SF3B2Q13435 895 aaKnown RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 LLGL1Q15334 1064 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 NAALADL2Q58DX5 795 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 NEK9Q8TD19 979 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 MS4A14Q96JA4 679 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 DDX47Q9H0S4 455 aaKnown RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 CNOT10Q9H9A5 744 aaKnown RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 KBTBD4Q9NVX7 518 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 KLHL14Q9P2G3 628 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 MRPL11Q9Y3B7 192 aaKnown RBP8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 A0A087X0B3 334 aa8.92□□□□□ -0.98
PRKAB1-207ENST00000542698 GRID2IPA4D2P6 1211 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms