RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 NSRP1Q9H0G5 558 aaKnown RBP11.95□□□□□ -0.5
DDX11-213ENST00000539049 CNOT10Q9H9A5 744 aaKnown RBP11.95□□□□□ -0.5
DDX11-213ENST00000539049 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
DDX11-213ENST00000539049 KCNH3Q9ULD8 1083 aa11.95□□□□□ -0.5
DDX11-213ENST00000539049 LRCH1Q9Y2L9 728 aa11.95□□□□□ -0.5
DDX11-213ENST00000539049 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
DDX11-213ENST00000539049 ITIH6Q6UXX5 1313 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 TRIM14Q14142 442 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 SLC39A14Q15043 492 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 GRAMD4Q6IC98 578 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 MAP7D3Q8IWC1 876 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 STK32AQ8WU08 396 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 TUBA8Q9NY65 449 aaPredicted RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 ZNF711Q9Y462 761 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 H0Y3Z8 333 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 SKIP12755 728 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 LSAMPQ13449 338 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 ERMARDQ5T6L9 678 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 APTXQ7Z2E3 356 aaKnown RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 SIKE1Q9BRV8 207 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 RBM12Q9NTZ6 932 aaKnown RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 EHD2Q9NZN4 543 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 RABL2BQ9UNT1 228 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 CD2APQ9Y5K6 639 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 MMEP08473 750 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 ETS2P15036 469 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 KCNQ4P56696 695 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 DHX9Q08211 1270 aaKnown RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 ZC3H18Q86VM9 953 aaKnown RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 IFNL2Q8IZJ0 200 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 AZIN2Q96A70 460 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 NUDCD1Q96RS6 583 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 SPATA16Q9BXB7 569 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 LACRTQ9GZZ8 138 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 MIS12Q9H081 205 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
DDX11-213ENST00000539049 CTNNAL1Q9UBT7 734 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 ITM2BQ9Y287 266 aa11.94□□□□□ -0.5
DDX11-213ENST00000539049 EIF3FO00303 357 aaPredicted RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 TACC1O75410 805 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 ITGA2BP08514 1039 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 METAP2P50579 478 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDX11-213ENST00000539049 SPATA1Q5VX52 437 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 PTF1AQ7RTS3 328 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 PALB2Q86YC2 1186 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 LRRC34Q8IZ02 419 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 MED15Q96RN5 788 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 GDF3Q9NR23 364 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 SYNRGQ9UMZ2 1314 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 MAGEA13PA6NCF6 341 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 NVLO15381 856 aaKnown RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 FGAP02671 866 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 IDO1P14902 403 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 HSPA9P38646 679 aaKnown RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 PTDSS1P48651 473 aaKnown RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 MECOMQ03112 1051 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 ZNF844Q08AG5 666 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 KRT71Q3SY84 523 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 AGBL2Q5U5Z8 902 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 PIGWQ7Z7B1 504 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDX11-213ENST00000539049 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
DDX11-213ENST00000539049 CROTQ9UKG9 612 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
DDX11-213ENST00000539049 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 TPBGLP0DKB5 382 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 CYLC1P35663 651 aaPredicted RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 IFIT5Q13325 482 aaKnown RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 ZNF572Q7Z3I7 529 aaPredicted RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 SAMD3Q8N6K7 520 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 NEK9Q8TD19 979 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 IQCDQ96DY2 449 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 ZMAT2Q96NC0 199 aaKnown RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 POLR3CQ9BUI4 534 aaPredicted RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 PFDN4Q9NQP4 134 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
DDX11-213ENST00000539049 TRIM33Q9UPN9 1127 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 EFR3BQ9Y2G0 817 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 FRMD4BQ9Y2L6 1034 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 A0A0J9YVX5 310 aa11.92□□□□□ -0.5
DDX11-213ENST00000539049 DYTNA2CJ06 578 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms