RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 NYAP2Q9P242 653 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-203ENST00000535977 MPHOSPH10O00566 681 aaKnown RBP19.74■□□□□ 0.75
RAB40C-203ENST00000535977 PPP1R11O60927 126 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-203ENST00000535977 IDEP14735 1019 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 CALRP27797 417 aaKnown RBP19.74■□□□□ 0.75
RAB40C-203ENST00000535977 HDLBPQ00341 1268 aaKnown RBP19.74■□□□□ 0.75
RAB40C-203ENST00000535977 KIF5AQ12840 1032 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 SIK3Q9Y2K2 1263 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 STK24Q9Y6E0 443 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 VAV2P52735 878 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 NBPF20Q3BBV1 942 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 MYOCDQ8IZQ8 938 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 HAS1Q92839 578 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 PURBQ96QR8 312 aaKnown RBP19.74■□□□□ 0.75
RAB40C-203ENST00000535977 HDAC6Q9UBN7 1215 aa19.74■□□□□ 0.75
RAB40C-203ENST00000535977 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
RAB40C-203ENST00000535977 GNA14O95837 355 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 TTBK2Q6IQ55 1244 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 KANSL2Q9H9L4 492 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 CYP3A7-CYP3A51PA0A087WV96 503 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 TARSL2A2RTX5 802 aaKnown RBP19.73■□□□□ 0.75
RAB40C-203ENST00000535977 ERCC3P19447 782 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 CYP3A7P24462 503 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 FKBP3Q00688 224 aaKnown RBP19.73■□□□□ 0.75
RAB40C-203ENST00000535977 PDCLQ13371 301 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 UBE2SQ16763 222 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 SLFN12Q8IYM2 578 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 NUCKS1Q9H1E3 243 aaKnown RBP19.73■□□□□ 0.75
RAB40C-203ENST00000535977 CENPHQ9H3R5 247 aa19.73■□□□□ 0.75
RAB40C-203ENST00000535977 USP17L10C9JJH3 530 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 AP3B2Q13367 1082 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 CRYMQ14894 314 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 CCNI2Q6ZMN8 369 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-203ENST00000535977 CCDC65Q8IXS2 484 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 CEP63Q96MT8 703 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 ENC1O14682 589 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 CRKP46108 304 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 SCNN1DP51172 638 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 CEP85LQ5SZL2 805 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 FMNL3Q8IVF7 1028 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 HPS3Q969F9 1004 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 DNAJC19Q96DA6 116 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 MASTLQ96GX5 879 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 PI4KBQ9UBF8 816 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 TRIM10Q9UDY6 481 aa19.72■□□□□ 0.75
RAB40C-203ENST00000535977 TMCO5BA8MYB1 307 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 IRF6O14896 467 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 LCA5LO95447 670 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 KLK7P49862 253 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 SMTNP53814 917 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 IQCEQ6IPM2 695 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 LRRC55Q6ZSA7 311 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 NUDT12Q9BQG2 462 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 TRIM6Q9C030 488 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-203ENST00000535977 PANK4Q9NVE7 773 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 SRGAP2O75044 1071 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 RASSF9O75901 435 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 INHBEP58166 350 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 COASYQ13057 564 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 DOK7Q18PE1 504 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 CCDC40Q4G0X9 1142 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 GRIPAP1Q4V328 841 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 KCTD1Q719H9 257 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 TRIM58Q8NG06 486 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 EEF2KMTQ96G04 330 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 MBOAT7Q96N66 472 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 IDI2Q9BXS1 227 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 MYH4Q9Y623 1939 aa19.71■□□□□ 0.75
RAB40C-203ENST00000535977 FRMD3A2A2Y4 597 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 GOLGA8KD6RF30 607 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 SLC16A2P36021 539 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 SLC1A4P43007 532 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 FAM26FQ5R3K3 315 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 SPATS2Q86XZ4 545 aaKnown RBP19.7■□□□□ 0.74
RAB40C-203ENST00000535977 CLEC10AQ8IUN9 316 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 VCPKMTQ9H867 229 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 DDX20Q9UHI6 824 aaKnown RBP19.7■□□□□ 0.74
RAB40C-203ENST00000535977 NRXN2Q9P2S2 1712 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 ANKRD31Q8N7Z5 1873 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 KCNK18Q7Z418 384 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 CAPZA3Q96KX2 299 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 HINFPQ9BQA5 517 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 MMRN2Q9H8L6 949 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 PCDHA1Q9Y5I3 950 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 COL4A3BPQ9Y5P4 624 aa19.7■□□□□ 0.74
RAB40C-203ENST00000535977 TBX3O15119 743 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 RTN2O75298 545 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 IRX1P78414 480 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-203ENST00000535977 SARNPP82979 210 aaKnown RBP19.69■□□□□ 0.74
RAB40C-203ENST00000535977 SKOR1P84550 965 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 CERKLQ49MI3 558 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-203ENST00000535977 RNF187Q5TA31 235 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-203ENST00000535977 CEP57Q86XR8 500 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 KCNMB3Q9NPA1 279 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 TACC1O75410 805 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 PRLRP16471 622 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 CLNS1AP54105 237 aaKnown RBP19.69■□□□□ 0.74
RAB40C-203ENST00000535977 QRICH1Q2TAL8 776 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms