RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 NT5C2P49902 561 aa15.05■□□□□ -0
COPB1-209ENST00000533096 IGBP1P78318 339 aa15.05■□□□□ -0
COPB1-209ENST00000533096 GHRHRQ02643 423 aa15.05■□□□□ -0
COPB1-209ENST00000533096 USP17L6PQ6QN14 398 aa15.05■□□□□ -0
COPB1-209ENST00000533096 RBM23Q86U06 439 aaKnown RBP15.05■□□□□ -0
COPB1-209ENST00000533096 CHD1LQ86WJ1 897 aa15.05■□□□□ -0
COPB1-209ENST00000533096 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ -0
COPB1-209ENST00000533096 DNAJB3Q8WWF6 145 aa15.05■□□□□ -0
COPB1-209ENST00000533096 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
COPB1-209ENST00000533096 RIOX1Q9H6W3 641 aa15.05■□□□□ -0
COPB1-209ENST00000533096 NCOR1O75376 2440 aa15.05■□□□□ -0
COPB1-209ENST00000533096 TRIP12Q14669 1992 aaPredicted RBP15.04■□□□□ -0
COPB1-209ENST00000533096 NRCAMQ92823 1304 aa15.04■□□□□ -0
COPB1-209ENST00000533096 ERICH2A1L162 156 aa15.04■□□□□ -0
COPB1-209ENST00000533096 HIP1O00291 1037 aa15.04■□□□□ -0
COPB1-209ENST00000533096 CYTH3O43739 400 aa15.04■□□□□ -0
COPB1-209ENST00000533096 HOXC8P31273 242 aa15.04■□□□□ -0
COPB1-209ENST00000533096 ICAM3P32942 547 aa15.04■□□□□ -0
COPB1-209ENST00000533096 NDUFV1P49821 464 aa15.04■□□□□ -0
COPB1-209ENST00000533096 SEMA3FQ13275 785 aa15.04■□□□□ -0
COPB1-209ENST00000533096 LPIN1Q14693 890 aa15.04■□□□□ -0
COPB1-209ENST00000533096 GRM4Q14833 912 aa15.04■□□□□ -0
COPB1-209ENST00000533096 SMAD2Q15796 467 aaKnown RBP15.04■□□□□ -0
COPB1-209ENST00000533096 CTC1Q2NKJ3 1217 aa15.04■□□□□ -0
COPB1-209ENST00000533096 PAN2Q504Q3 1202 aaKnown RBP15.04■□□□□ -0
COPB1-209ENST00000533096 RSPH3Q86UC2 560 aa15.04■□□□□ -0
COPB1-209ENST00000533096 MICAL1Q8TDZ2 1067 aa15.04■□□□□ -0
COPB1-209ENST00000533096 GLG1Q92896 1179 aa15.04■□□□□ -0
COPB1-209ENST00000533096 CUL5Q93034 780 aa15.04■□□□□ -0
COPB1-209ENST00000533096 ZBTB10Q96DT7 871 aa15.04■□□□□ -0
COPB1-209ENST00000533096 LMAN2LQ9H0V9 348 aa15.04■□□□□ -0
COPB1-209ENST00000533096 CD207Q9UJ71 328 aa15.04■□□□□ -0
COPB1-209ENST00000533096 TRANK1O15050 2925 aa15.03■□□□□ -0
COPB1-209ENST00000533096 TCF7P36402 384 aaPredicted RBP15.03■□□□□ -0
COPB1-209ENST00000533096 PPFIA1Q13136 1202 aa15.03■□□□□ -0
COPB1-209ENST00000533096 ADAM15Q13444 863 aa15.03■□□□□ -0
COPB1-209ENST00000533096 COL19A1Q14993 1142 aa15.03■□□□□ -0
COPB1-209ENST00000533096 NLRX1Q86UT6 975 aa15.03■□□□□ -0
COPB1-209ENST00000533096 PBXIP1Q96AQ6 731 aa15.03■□□□□ -0
COPB1-209ENST00000533096 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
COPB1-209ENST00000533096 PHOX2BQ99453 314 aa15.03■□□□□ -0
COPB1-209ENST00000533096 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
COPB1-209ENST00000533096 FAM49AQ9H0Q0 323 aaPredicted RBP15.03■□□□□ -0
COPB1-209ENST00000533096 PLAGL2Q9UPG8 496 aa15.03■□□□□ -0
COPB1-209ENST00000533096 RWDD3Q9Y3V2 267 aa15.03■□□□□ -0
COPB1-209ENST00000533096 C5orf67F2Z3F1 127 aa15.02■□□□□ -0
COPB1-209ENST00000533096 ATP9AO75110 1047 aa15.02■□□□□ -0
COPB1-209ENST00000533096 STAM2O75886 525 aa15.02■□□□□ -0
COPB1-209ENST00000533096 DGKIO75912 1065 aa15.02■□□□□ -0
COPB1-209ENST00000533096 IGHDP01880 384 aa15.02■□□□□ -0
COPB1-209ENST00000533096 CD52P31358 61 aa15.02■□□□□ -0
COPB1-209ENST00000533096 ADAM17P78536 824 aa15.02■□□□□ -0
COPB1-209ENST00000533096 TMEM62Q0P6H9 643 aa15.02■□□□□ -0
COPB1-209ENST00000533096 WTAPQ15007 396 aa15.02■□□□□ -0
COPB1-209ENST00000533096 GRIK4Q16099 956 aa15.02■□□□□ -0
COPB1-209ENST00000533096 IER5LQ5T953 404 aa15.02■□□□□ -0
COPB1-209ENST00000533096 RTN4RL1Q86UN2 441 aaPredicted RBP15.02■□□□□ -0
COPB1-209ENST00000533096 EDAQ92838 391 aa15.02■□□□□ -0
COPB1-209ENST00000533096 EHMT1Q9H9B1 1298 aa15.02■□□□□ -0
COPB1-209ENST00000533096 CDY2AQ9Y6F7 541 aa15.02■□□□□ -0
COPB1-209ENST00000533096 MRPL42Q9Y6G3 142 aaKnown RBP15.02■□□□□ -0
COPB1-209ENST00000533096 ADGRA3Q8IWK6 1321 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 COL4A4P53420 1690 aaPredicted RBP15.01□□□□□ -0.01
COPB1-209ENST00000533096 TBX10O75333 385 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 DNAJB1P25685 340 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 NRIP1P48552 1158 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 SMAD4Q13485 552 aaKnown RBP15.01□□□□□ -0.01
COPB1-209ENST00000533096 CAMK1Q14012 370 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 HERC4Q5GLZ8 1057 aaPredicted RBP15.01□□□□□ -0.01
COPB1-209ENST00000533096 TAF2Q6P1X5 1199 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 ADGRD2Q7Z7M1 963 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 SEPT1Q8WYJ6 367 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 KCNH6Q9H252 994 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 IL25Q9H293 177 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 AGO3Q9H9G7 860 aaKnown RBP15.01□□□□□ -0.01
COPB1-209ENST00000533096 TANC1Q9C0D5 1861 aa15.01□□□□□ -0.01
COPB1-209ENST00000533096 GSTTP1A0A1W2PQM5 241 aa15□□□□□ -0.01
COPB1-209ENST00000533096 PER2O15055 1255 aa15□□□□□ -0.01
COPB1-209ENST00000533096 LINC00271P0C7V0 271 aa15□□□□□ -0.01
COPB1-209ENST00000533096 GATMP50440 423 aa15□□□□□ -0.01
COPB1-209ENST00000533096 NUCB1Q02818 461 aa15□□□□□ -0.01
COPB1-209ENST00000533096 FBXO47Q5MNV8 452 aa15□□□□□ -0.01
COPB1-209ENST00000533096 SPOUT1Q5T280 376 aaKnown RBP15□□□□□ -0.01
COPB1-209ENST00000533096 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
COPB1-209ENST00000533096 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
COPB1-209ENST00000533096 SMC5Q8IY18 1101 aa15□□□□□ -0.01
COPB1-209ENST00000533096 KLHL23Q8NBE8 558 aa15□□□□□ -0.01
COPB1-209ENST00000533096 GIMAP8Q8ND71 665 aaPredicted RBP15□□□□□ -0.01
COPB1-209ENST00000533096 SPPL3Q8TCT6 385 aa15□□□□□ -0.01
COPB1-209ENST00000533096 CLP1Q92989 425 aaKnown RBP15□□□□□ -0.01
COPB1-209ENST00000533096 PPP2R3CQ969Q6 453 aa15□□□□□ -0.01
COPB1-209ENST00000533096 ZNF689Q96CS4 500 aaPredicted RBP15□□□□□ -0.01
COPB1-209ENST00000533096 RRP36Q96EU6 259 aaKnown RBP15□□□□□ -0.01
COPB1-209ENST00000533096 RPGRIP1Q96KN7 1286 aa15□□□□□ -0.01
COPB1-209ENST00000533096 SENP7Q9BQF6 1050 aa15□□□□□ -0.01
COPB1-209ENST00000533096 OSBPL3Q9H4L5 887 aa15□□□□□ -0.01
COPB1-209ENST00000533096 TUBE1Q9UJT0 475 aa15□□□□□ -0.01
COPB1-209ENST00000533096 LRFN2Q9ULH4 789 aa15□□□□□ -0.01
COPB1-209ENST00000533096 PCDHGC5Q9Y5F6 944 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms