RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 FTCDO95954 541 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 DNA2P51530 1060 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 LRRC4BQ9NT99 713 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 AIPL1Q9NZN9 384 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 ADAMTS1Q9UHI8 967 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 KLHL30Q0D2K2 578 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 ENOX2Q16206 610 aaKnown RBP21.42■■□□□ 1.02
PCF11-203ENST00000530304 ARSHQ5FYA8 562 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 KCNMB3Q9NPA1 279 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 OPA1O60313 960 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 GLI1P08151 1106 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 EPS15P42566 896 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 KIAA0753Q2KHM9 967 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 ALS2CLQ60I27 953 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 ZC3H3Q8IXZ2 948 aaKnown RBP21.42■■□□□ 1.02
PCF11-203ENST00000530304 CERS5Q8N5B7 392 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 PACSIN1Q9BY11 444 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 ZHX3Q9H4I2 956 aa21.42■■□□□ 1.02
PCF11-203ENST00000530304 MYO3BQ8WXR4 1341 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 MED24O75448 989 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 SLURP2P0DP57 97 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
PCF11-203ENST00000530304 STAT3P40763 770 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 KCNH2Q12809 1159 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 PPFIA1Q13136 1202 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 MEI1Q5TIA1 1274 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 IFT20Q8IY31 132 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 PCDHGC5Q9Y5F6 944 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 KRT18P05783 430 aaKnown RBP21.41■■□□□ 1.02
PCF11-203ENST00000530304 ADRA2BP18089 450 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 IRAK1P51617 712 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 USP11P51784 963 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 SLC12A3P55017 1021 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 SKIDA1Q1XH10 827 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 GANQ9H2C0 597 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 GDF3Q9NR23 364 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 PACSIN2Q9UNF0 486 aaPredicted RBP21.41■■□□□ 1.02
PCF11-203ENST00000530304 SUGT1Q9Y2Z0 365 aa21.41■■□□□ 1.02
PCF11-203ENST00000530304 FRMD3A2A2Y4 597 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 HSF2BPO75031 334 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 ASIC2Q16515 512 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 EDRF1Q3B7T1 1238 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 MXD3Q9BW11 206 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 PCDHA1Q9Y5I3 950 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 POTEFA5A3E0 1075 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 CETN3O15182 167 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 POTEIP0CG38 1075 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 EPB41P11171 864 aaKnown RBP21.4■■□□□ 1.02
PCF11-203ENST00000530304 CARSP49589 748 aaKnown RBP21.4■■□□□ 1.02
PCF11-203ENST00000530304 QRICH1Q2TAL8 776 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 POTEGQ6S5H5 508 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 POTEEQ6S8J3 1075 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 ANO3Q9BYT9 981 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 COA1Q9GZY4 146 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 EPB41L5Q9HCM4 733 aa21.4■■□□□ 1.02
PCF11-203ENST00000530304 C10orf71Q711Q0 1435 aa21.39■■□□□ 1.02
PCF11-203ENST00000530304 MYH4Q9Y623 1939 aa21.39■■□□□ 1.02
PCF11-203ENST00000530304 RAD21O60216 631 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 NR2F2P24468 414 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 SCNN1DP51172 638 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 CASP5P51878 434 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 ARL8AQ96BM9 186 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 CRAMP1Q96RY5 1269 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 RUFY1Q96T51 708 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 CAPS2Q9BXY5 557 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 NFU1Q9UMS0 254 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 PITPNM2Q9BZ72 1349 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 CYP3A7-CYP3A51PA0A087WV96 503 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 ZSCAN5CA6NGD5 496 aaPredicted RBP21.39■■□□□ 1.01
PCF11-203ENST00000530304 HEXIM1O94992 359 aaKnown RBP21.39■■□□□ 1.01
PCF11-203ENST00000530304 CYP3A7P24462 503 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 GUCY2DQ02846 1103 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 NNTQ13423 1086 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 BBXQ8WY36 941 aaPredicted RBP21.39■■□□□ 1.01
PCF11-203ENST00000530304 GLT8D2Q9H1C3 349 aa21.39■■□□□ 1.01
PCF11-203ENST00000530304 DHX36Q9H2U1 1008 aaKnown RBP21.39■■□□□ 1.01
PCF11-203ENST00000530304 ESYT3A0FGR9 886 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 GRID2IPA4D2P6 1211 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 ACTN1P12814 892 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 TTMPQ5BVD1 217 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 CDC42EP5Q6NZY7 148 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 CATSPER3Q86XQ3 398 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 SLFN12Q8IYM2 578 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 IFT81Q8WYA0 676 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 ZIM3Q96PE6 472 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 HDAC9Q9UKV0 1011 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 ANKRD65E5RJM6 399 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 SLC26A4O43511 780 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 RNASE9P60153 205 aaKnown RBP21.38■■□□□ 1.01
PCF11-203ENST00000530304 DNAJC21Q5F1R6 531 aaKnown RBP21.38■■□□□ 1.01
PCF11-203ENST00000530304 GBP6Q6ZN66 633 aa21.38■■□□□ 1.01
PCF11-203ENST00000530304 FAM153BP0C7A2 387 aa21.37■■□□□ 1.01
PCF11-203ENST00000530304 PSMC6P62333 389 aa21.37■■□□□ 1.01
PCF11-203ENST00000530304 PTK2Q05397 1052 aa21.37■■□□□ 1.01
PCF11-203ENST00000530304 FAM153CQ494X1 144 aa21.37■■□□□ 1.01
PCF11-203ENST00000530304 MBOAT7Q96N66 472 aa21.37■■□□□ 1.01
PCF11-203ENST00000530304 INPP4AQ96PE3 977 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms