RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 CENPQQ7L2Z9 268 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-204ENST00000529288 LMBR1Q8WVP7 490 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 SEPT1Q8WYJ6 367 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 PGBD1Q96JS3 809 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 NECAB3Q96P71 396 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-204ENST00000529288 OSBPL7Q9BZF2 842 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 RBM28Q9NW13 759 aaKnown RBP14.9□□□□□ -0.02
CPSF1-204ENST00000529288 TANC1Q9C0D5 1861 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 GSTTP1A0A1W2PQM5 241 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 GOLGA8AA7E2F4 631 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 GOLGA8BA8MQT2 603 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 ZBTB43O43298 467 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 KCNA2P16389 499 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 POU3F3P20264 500 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-204ENST00000529288 PPFIA1Q13136 1202 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 WWC2Q6AWC2 1192 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 APOA5Q6Q788 366 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 DHX32Q7L7V1 743 aaKnown RBP14.89□□□□□ -0.03
CPSF1-204ENST00000529288 SGMS1Q86VZ5 419 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 YME1L1Q96TA2 773 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 SUGCTQ9HAC7 445 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 JADE2Q9NQC1 790 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 BRPF3Q9ULD4 1205 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 INSL6Q9Y581 213 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 UBIAD1Q9Y5Z9 338 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-204ENST00000529288 CHD7Q9P2D1 2997 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 NRCAMQ92823 1304 aa14.89□□□□□ -0.03
CPSF1-204ENST00000529288 MYH7BA7E2Y1 1941 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 TRIP12Q14669 1992 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-204ENST00000529288 KLF18A0A0U1RQI7 1052 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 LPXNO60711 386 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 CAND2O75155 1236 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 CDC45O75419 566 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 HOXC8P31273 242 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 ERVK-21P61565 698 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 ADCK5Q3MIX3 580 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 RUFY4Q6ZNE9 571 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 HLA-CQ95604 372 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 C17orf80Q9BSJ5 609 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 ERAP1Q9NZ08 941 aa14.88□□□□□ -0.03
CPSF1-204ENST00000529288 TET1Q8NFU7 2136 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 GHRP10912 638 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 BMP1P13497 986 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 ZNF76P36508 570 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 ADCY7P51828 1080 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 EXOSC10Q01780 885 aaKnown RBP14.87□□□□□ -0.03
CPSF1-204ENST00000529288 GRIK4Q16099 956 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 RSPH3Q86UC2 560 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 DNAJB3Q8WWF6 145 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 ZBTB10Q96DT7 871 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 MXRA8Q9BRK3 442 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 SDF4Q9BRK5 362 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 IFIH1Q9BYX4 1025 aaKnown RBP14.87□□□□□ -0.03
CPSF1-204ENST00000529288 SMARCAD1Q9H4L7 1026 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 AZI2Q9H6S1 392 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 TMEM260Q9NX78 707 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 COG5Q9UP83 839 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 CNTNAP5Q8WYK1 1306 aa14.87□□□□□ -0.03
CPSF1-204ENST00000529288 SPTBN5Q9NRC6 3674 aaKnown RBP14.86□□□□□ -0.03
CPSF1-204ENST00000529288 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 CHRNA1P02708 482 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 ARP10275 920 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 CPA1P15085 419 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 KRT32Q14532 448 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 UIMC1Q96RL1 719 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 ANO3Q9BYT9 981 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 FAM49AQ9H0Q0 323 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-204ENST00000529288 JPH1Q9HDC5 661 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-204ENST00000529288 RIC8AQ9NPQ8 531 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 SLC9A2Q9UBY0 812 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 TUBE1Q9UJT0 475 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 TRPC6Q9Y210 931 aa14.86□□□□□ -0.03
CPSF1-204ENST00000529288 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-204ENST00000529288 DDX39AO00148 427 aaKnown RBP14.85□□□□□ -0.03
CPSF1-204ENST00000529288 STXBP3O00186 592 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 MAFGO15525 162 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 ADAM17P78536 824 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 HTRA4P83105 476 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-204ENST00000529288 FAM26DQ5JW98 314 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 JAKMIP3Q5VZ66 844 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 TAF2Q6P1X5 1199 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 APBB2Q92870 758 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 TOP1MTQ969P6 601 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 KCNH7Q9NS40 1196 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 LMCD1Q9NZU5 365 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 MYO9BQ13459 2157 aa14.85□□□□□ -0.03
CPSF1-204ENST00000529288 FOSP01100 380 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-204ENST00000529288 INSRRP14616 1297 aa14.84□□□□□ -0.03
CPSF1-204ENST00000529288 IBSPP21815 317 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-204ENST00000529288 CDC27P30260 824 aa14.84□□□□□ -0.03
CPSF1-204ENST00000529288 ADD1P35611 737 aaKnown RBP14.84□□□□□ -0.03
CPSF1-204ENST00000529288 METAP2P50579 478 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■□□□ 13.8
CPSF1-204ENST00000529288 TMEM62Q0P6H9 643 aa14.84□□□□□ -0.03
CPSF1-204ENST00000529288 APOBRQ0VD83 1088 aa14.84□□□□□ -0.03
CPSF1-204ENST00000529288 EPC2Q52LR7 807 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms