RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TUBA4AP68366 448 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 DR1Q01658 176 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 LRRC74AQ0VAA2 488 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 STIM1Q13586 685 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 BTG3Q14201 252 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CCDC38Q502W7 563 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 MFSD14BQ5SR56 506 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 WLSQ5T9L3 541 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 LRRC31Q6UY01 552 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CATSPER4Q7RTX7 472 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 DGLUCYQ7Z3D6 616 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 RASAL3Q86YV0 1011 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CRACR2BQ8N4Y2 399 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 PPHLN1Q8NEY8 458 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 TSC1Q92574 1164 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 NELL1Q92832 810 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CUL5Q93034 780 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 RBM41Q96IZ5 413 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 EIF3CQ99613 913 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 MTRQ99707 1265 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 UQCC2Q9BRT2 126 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 PRKAG2Q9UGJ0 569 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 TUBGCP4Q9UGJ1 667 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 PA2G4Q9UQ80 394 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 C2CD2Q9Y426 696 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 SNX5Q9Y5X3 404 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 EYA2O00167 538 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 MCF2LO15068 1137 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 NMT2O60551 498 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 KRT18P05783 430 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 GNAI3P08754 354 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 ZBTB48P10074 688 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 SLC5A1P13866 664 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 ENDOUP21128 410 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 SKIV2L2P42285 1042 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 IREB2P48200 963 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 KIF23Q02241 960 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 Q3C1V9 767 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 CFAP100Q494V2 611 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 USP51Q70EK9 711 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 TADA2BQ86TJ2 420 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 RAB11FIP4Q86YS3 637 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 IFNL3Q8IZI9 196 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 ANKRD44Q8N8A2 993 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 SPERTQ8NA61 448 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 OR8K1Q8NGG5 319 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 EPS8L3Q8TE67 593 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 PARD3BQ8TEW8 1205 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 LPIN2Q92539 896 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 DPF3Q92784 378 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 NRBF2Q96F24 287 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 KAZALD1Q96I82 304 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 ZNF594Q96JF6 807 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 CLMNQ96JQ2 1002 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 TBATAQ96M53 351 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 CTAGE1Q96RT6 745 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 MRIQ9BWK5 157 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 DEFB129Q9H1M3 183 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 PIH1D1Q9NWS0 290 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 TMOD2Q9NZR1 351 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 PPP1R9AQ9ULJ8 1098 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 MRPS23Q9Y3D9 190 aaKnown RBP8.3□□□□□ -1.08
HDAC3-216ENST00000523088 MRFAP1Q9Y605 127 aa8.3□□□□□ -1.08
HDAC3-216ENST00000523088 ASTN2O75129 1339 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CLRN2A0PK11 232 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CCDC162PA2VCL2 907 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 EME2A4GXA9 379 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 MANSC4A6NHS7 340 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 ZEB2O60315 1214 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 BPNT1O95861 308 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 PENKP01210 267 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 KRT13P13646 458 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CDC27P30260 824 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 NOS2P35228 1153 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 IL15P40933 162 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 UBA7P41226 1012 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 DMPKQ09013 629 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 PAK2Q13177 524 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 LAPTM5Q13571 262 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 PKN2Q16513 984 aaKnown RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 BRDTQ58F21 947 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 TNNI3KQ59H18 835 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 PCNX4Q63HM2 1172 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 INTS8Q75QN2 995 aaKnown RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 FBXO33Q7Z6M2 555 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms