RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 GABPAQ06546 454 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 TCP10Q12799 353 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 GRB10Q13322 594 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CALCRLQ16602 461 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 DCAF8Q5TAQ9 597 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 NCAPH2Q6IBW4 605 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 HDXQ7Z353 690 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ZFPM1Q8IX07 1006 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 MSL3Q8N5Y2 521 aaKnown RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 LMBR1Q8WVP7 490 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 GOLGA1Q92805 767 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 P2RX5Q93086 422 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 AK8Q96MA6 479 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 RANBP17Q9H2T7 1088 aaKnown RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SEMA6BQ9H3T3 888 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 POLD4Q9HCU8 107 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 USP40Q9NVE5 1235 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 HDAC6Q9UBN7 1215 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SERPINB13Q9UIV8 391 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CDC23Q9UJX2 597 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 DUSP10Q9Y6W6 482 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 RCCD1A6NED2 376 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SRGAP2O75044 1071 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 RTN3O95197 1032 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 MYL1P05976 194 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ZNF16P17020 682 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CCNE1P24864 410 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 MTIF2P46199 727 aaKnown RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ADCY7P51828 1080 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 LRRC41Q15345 812 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ECM1Q16610 540 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 MIIPQ5JXC2 388 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 BEND6Q5SZJ8 279 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SPATA21Q7Z572 469 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SRGAP1Q7Z6B7 1085 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SLF2Q8IX21 1173 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ADGRF4Q8IZF3 695 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SNX29Q8TEQ0 813 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 SAAL1Q96ER3 474 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CALML4Q96GE6 196 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 PNMA5Q96PV4 448 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 MTMR9Q96QG7 549 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 NOC4LQ9BVI4 516 aaKnown RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 TSGA10Q9BZW7 698 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ZC3H12CQ9C0D7 883 aaKnown RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 LACRTQ9GZZ8 138 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 THAP9Q9H5L6 903 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 ANKZF1Q9H8Y5 726 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 JMJD4Q9H9V9 463 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 LY75O60449 1722 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 MYH1P12882 1939 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L15C9J2P7 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L10C9JJH3 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L13C9JLJ4 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L11C9JVI0 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L18D6R9N7 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L22D6RA61 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L17D6RBQ6 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L19D6RCP7 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L20D6RJB6 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 EPHB6O15197 1021 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 ZEB2O60315 1214 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 TTLL1O95922 423 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 PLEKP08567 350 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SETSIPP0DME0 302 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SRGNP10124 158 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 NAT1P18440 290 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 HOXA10P31260 410 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SHMT1P34896 483 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 MAGEA10P43363 369 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 NOVP48745 357 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 NT5C2P49902 561 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 DNM2P50570 870 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 HERVK_113P62684 666 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L24Q0WX57 530 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 TRIM14Q14142 442 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC122Q5T0U0 273 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 USP17L6PQ6QN14 398 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 KRT26Q7Z3Y9 468 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CEP57Q86XR8 500 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC155Q8N6L0 562 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 NOA1Q8NC60 698 aaKnown RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 B4GALNT2Q8NHY0 566 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 LARP4BQ92615 738 aaKnown RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 DHTKD1Q96HY7 919 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CDK5RAP3Q96JB5 506 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 DNAJC7Q99615 494 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 NAPGQ99747 312 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 C7orf25Q9BPX7 421 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 TTYH3Q9C0H2 523 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 DBNDD1Q9H9R9 158 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 FAM207AQ9NSI2 230 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CAPN11Q9UMQ6 739 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 THSD7AQ9UPZ6 1657 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 A0A1W2PQC6 194 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC151A5D8V7 595 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SPDYE2BA6NHP3 402 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms