RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TRIM50Q86XT4 487 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 SMRP1Q8NCR6 262 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 AMNQ9BXJ7 453 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
HDAC6-236ENST00000498808 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 KDM4AO75164 1064 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
HDAC6-236ENST00000498808 GNAT1P11488 350 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 VCPP55072 806 aaKnown RBP18.15■□□□□ 0.5
HDAC6-236ENST00000498808 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
HDAC6-236ENST00000498808 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-236ENST00000498808 LMBR1Q8WVP7 490 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 EHMT1Q9H9B1 1298 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 MAP3K20Q9NYL2 800 aaKnown RBP18.15■□□□□ 0.5
HDAC6-236ENST00000498808 TELO2Q9Y4R8 837 aa18.15■□□□□ 0.5
HDAC6-236ENST00000498808 ZFHX2Q9C0A1 2572 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-236ENST00000498808 NOP56O00567 594 aaKnown RBP18.14■□□□□ 0.49
HDAC6-236ENST00000498808 ENPP3O14638 875 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 CCND2P30279 289 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 ARHGAP4P98171 946 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 COASYQ13057 564 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 IQCA1Q86XH1 822 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 EFHBQ8N7U6 833 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 ENAHQ8N8S7 591 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-236ENST00000498808 P2RX5Q93086 422 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 MTMR8Q96EF0 704 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 GPR20Q99678 358 aa18.14■□□□□ 0.49
HDAC6-236ENST00000498808 DGKIO75912 1065 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 GLP2RO95838 553 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 ITGB1P05556 798 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 SIGLEC14Q08ET2 396 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 MGAT3Q09327 533 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 SEMA3FQ13275 785 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 LPIN1Q14693 890 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 SPPL3Q8TCT6 385 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 ASIC4Q96FT7 647 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 ZSCAN10Q96SZ4 725 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-236ENST00000498808 USP15Q9Y4E8 981 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-236ENST00000498808 MRPL42Q9Y6G3 142 aaKnown RBP18.13■□□□□ 0.49
HDAC6-236ENST00000498808 PLXNA3P51805 1871 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 KAT6AQ92794 2004 aa18.13■□□□□ 0.49
HDAC6-236ENST00000498808 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 B4E1Z4 1266 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 RUFY4Q6ZNE9 571 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 CYFIP1Q7L576 1253 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 SAMD3Q8N6K7 520 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 LINC01599Q8WXQ3 324 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 PPP2R3CQ969Q6 453 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 BARX2Q9UMQ3 279 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-236ENST00000498808 PCDHA1Q9Y5I3 950 aa18.12■□□□□ 0.49
HDAC6-236ENST00000498808 PTPRZ1P23471 2315 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-236ENST00000498808 ZNF213O14771 459 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 ZBTB5O15062 677 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 ICAM3P32942 547 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 NRIP1P48552 1158 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 PDE1AP54750 535 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 MRPS9P82933 396 aaKnown RBP18.11■□□□□ 0.49
HDAC6-236ENST00000498808 UTP14CQ5TAP6 766 aaKnown RBP18.11■□□□□ 0.49
HDAC6-236ENST00000498808 FCHSD1Q86WN1 690 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 INPP4AQ96PE3 977 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-236ENST00000498808 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-236ENST00000498808 PCDHGC5Q9Y5F6 944 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 SPTBN4Q9H254 2564 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 MYO15AQ9UKN7 3530 aa18.11■□□□□ 0.49
HDAC6-236ENST00000498808 NRCAMQ92823 1304 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 SPATA31C2B4DYI2 1134 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 GCOM1H8Y6P7 765 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-236ENST00000498808 POLR2MP0CAP2 368 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 AVPR2P30518 371 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 NT5C2P49902 561 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 NEDD9Q14511 834 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 SLC35G1Q2M3R5 365 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 FBXO47Q5MNV8 452 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 RBM23Q86U06 439 aaKnown RBP18.1■□□□□ 0.49
HDAC6-236ENST00000498808 CRIPAKQ8N1N5 446 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 KLHL23Q8NBE8 558 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 POF1BQ8WVV4 589 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 PHF7Q9BWX1 381 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-236ENST00000498808 ZSWIM5Q9P217 1185 aa18.1■□□□□ 0.49
HDAC6-236ENST00000498808 PLXNA4Q9HCM2 1894 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 FRMPD4Q14CM0 1322 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 GNPTABQ3T906 1256 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 NAALADL2Q58DX5 795 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 TAF2Q6P1X5 1199 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 TICAM2Q86XR7 235 aa18.09■□□□□ 0.49
HDAC6-236ENST00000498808 CMTR2Q8IYT2 770 aaKnown RBP18.09■□□□□ 0.49
HDAC6-236ENST00000498808 ATOH1Q92858 354 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-236ENST00000498808 AGO3Q9H9G7 860 aaKnown RBP18.09■□□□□ 0.49
HDAC6-236ENST00000498808 BAZ2BQ9UIF8 2168 aaKnown RBP18.08■□□□□ 0.49
HDAC6-236ENST00000498808 RBM10P98175 930 aaKnown RBP18.08■□□□□ 0.48
HDAC6-236ENST00000498808 FOXK2Q01167 660 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 SP4Q02446 784 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms