RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
VARS-228ENST00000495010 KCNH6Q9H252 994 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 COL4A6Q14031 1691 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 NLRC5Q86WI3 1866 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 RALGAPA2Q2PPJ7 1873 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 POTEB3A0JP26 581 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 C5orf67F2Z3F1 127 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 GHRP10912 638 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 BTG3Q14201 252 aaPredicted RBP16.44■□□□□ 0.22
VARS-228ENST00000495010 COL19A1Q14993 1142 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 WTAPQ15007 396 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 CLUL1Q15846 466 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 POTEBQ6S5H4 581 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 RALYLQ86SE5 291 aaKnown RBP16.44■□□□□ 0.22
VARS-228ENST00000495010 IGFLR1Q9H665 355 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
VARS-228ENST00000495010 C19orf67A6NJJ6 358 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 GRM6O15303 877 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 CSPG5O95196 566 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 CHRNA1P02708 482 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 MRE11P49959 708 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 NUCB1Q02818 461 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 XRRA1Q6P2D8 792 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 CATIPQ7Z7H3 387 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 PPP2R3CQ969Q6 453 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 MFSD14AQ96MC6 490 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 SENP7Q9BQF6 1050 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
VARS-228ENST00000495010 FRMPD4Q14CM0 1322 aa16.43■□□□□ 0.22
VARS-228ENST00000495010 CYTH3O43739 400 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 IRS1P35568 1242 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 TCF7P36402 384 aaPredicted RBP16.42■□□□□ 0.22
VARS-228ENST00000495010 ADAM17P78536 824 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 HYAL1Q12794 435 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 SMAD2Q15796 467 aaKnown RBP16.42■□□□□ 0.22
VARS-228ENST00000495010 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 PCNX4Q63HM2 1172 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 MUC6Q6W4X9 2439 aa16.42■□□□□ 0.22
VARS-228ENST00000495010 ENPP3O14638 875 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 MBTPS2O43462 519 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 LTBRP36941 435 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 NHLH1Q02575 133 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 LPIN1Q14693 890 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 CTC1Q2NKJ3 1217 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 GLG1Q92896 1179 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
VARS-228ENST00000495010 CDHR1Q96JP9 859 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 PLVAPQ9BX97 442 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 SEC63Q9UGP8 760 aaKnown RBP16.41■□□□□ 0.22
VARS-228ENST00000495010 CD207Q9UJ71 328 aa16.41■□□□□ 0.22
VARS-228ENST00000495010 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
VARS-228ENST00000495010 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 STXBP3O00186 592 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 NDUFV1P49821 464 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 TROAPQ12815 778 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
VARS-228ENST00000495010 GRIK4Q16099 956 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 HFE2Q6ZVN8 426 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
VARS-228ENST00000495010 DNAJB3Q8WWF6 145 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 SEPT1Q8WYJ6 367 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 CLP1Q92989 425 aaKnown RBP16.4■□□□□ 0.22
VARS-228ENST00000495010 ALG13Q9NP73 1137 aaKnown RBP16.4■□□□□ 0.22
VARS-228ENST00000495010 MUTYHQ9UIF7 546 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
VARS-228ENST00000495010 DOCK5Q9H7D0 1870 aa16.39■□□□□ 0.22
VARS-228ENST00000495010 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
VARS-228ENST00000495010 M0QZ92 97 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 MMP1P03956 469 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 RPLP2P05387 115 aaKnown RBP16.39■□□□□ 0.21
VARS-228ENST00000495010 MARK3P27448 753 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 DLX2Q07687 328 aaPredicted RBP16.39■□□□□ 0.21
VARS-228ENST00000495010 MGAT3Q09327 533 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 FBXO47Q5MNV8 452 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 TSHZ1Q6ZSZ6 1077 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 RNF135Q8IUD6 432 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 GPRASP2Q96D09 838 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 CDY2AQ9Y6F7 541 aa16.39■□□□□ 0.21
VARS-228ENST00000495010 PIK3CDO00329 1044 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 DGKIO75912 1065 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 IGHDP01880 384 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 CYP21A2P08686 494 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 KIF5BP33176 963 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.21
VARS-228ENST00000495010 IGBP1P78318 339 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 HERC4Q5GLZ8 1057 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms