RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TDP2O95551 362 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 CD4P01730 458 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 SFNP31947 248 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 ACTR2P61160 394 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 PSMC6P62333 389 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 GNL2Q13823 731 aaKnown RBP12.54□□□□□ -0.4
CPSF7-212ENST00000489728 MFSD10Q14728 455 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 C7orf31Q8N865 590 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 ETNPPLQ8TBG4 499 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 SMARCAD1Q9H4L7 1026 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 KCNMB3Q9NPA1 279 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 PDLIM7Q9NR12 457 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 IGKV6D-21A0A0A0MT36 114 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 WDR64B1ANS9 1081 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
CPSF7-212ENST00000489728 GAS7O60861 476 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 PSMD10O75832 226 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
CPSF7-212ENST00000489728 HOXC8P31273 242 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 JAK3P52333 1124 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 FAAP100Q0VG06 881 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 EARS2Q5JPH6 523 aaKnown RBP12.53□□□□□ -0.4
CPSF7-212ENST00000489728 LRCH2Q5VUJ6 765 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 FAM160B1Q5W0V3 765 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 MIS18BP1Q6P0N0 1132 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 AZI2Q9H6S1 392 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
CPSF7-212ENST00000489728 NOL7Q9UMY1 257 aaKnown RBP12.53□□□□□ -0.4
CPSF7-212ENST00000489728 H0YGN5 161 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 H3BQV1 296 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 SLC37A4O43826 429 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 SORBS3O60504 671 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.41
CPSF7-212ENST00000489728 CCNE2O96020 404 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 GNAT1P11488 350 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 FOSBP53539 338 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 SP4Q02446 784 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.41
CPSF7-212ENST00000489728 B3GNT9Q6UX72 402 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 ABHD15Q6UXT9 468 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 NRCAMQ92823 1304 aa12.52□□□□□ -0.41
CPSF7-212ENST00000489728 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 B4GALT4O60513 344 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 NEMFO60524 1076 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 PSAPP07602 524 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 RBL2Q08999 1139 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 PPP2R5CQ13362 524 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 GLG1Q92896 1179 aa12.51□□□□□ -0.41
CPSF7-212ENST00000489728 C17orf102A2RUQ5 167 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 DDX39AO00148 427 aaKnown RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 CAND2O75155 1236 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 TIMP1P01033 207 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 SMIM10L2AP0DMW4 78 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 SMIM10L2BP0DMW5 78 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 STAT5BP51692 787 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 PTK7Q13308 1070 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 CALCRLQ16602 461 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 PTGISQ16647 500 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 RILPL1Q5EBL4 403 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 UTP14CQ5TAP6 766 aaKnown RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 BRAPQ7Z569 592 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 TRIM50Q86XT4 487 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 CAGE1Q8TC20 777 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 FAM167AQ96KS9 214 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 PCYT2Q99447 389 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 PRDM5Q9NQX1 630 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 ZNF302Q9NR11 478 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 DISC1Q9NRI5 854 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 HDAC6Q9UBN7 1215 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-212ENST00000489728 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
CPSF7-212ENST00000489728 COL1A2P08123 1366 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 A0A1W2PPC1 479 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 RRN3P2A6NIE6 340 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms