RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CCPG1Q9ULG6 757 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 NFIBO00712 420 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 POLR3GO15318 223 aaPredicted RBP20.37■□□□□ 0.85
COL16A1-215ENST00000488897 HOXA13P31271 388 aaPredicted RBP20.37■□□□□ 0.85
COL16A1-215ENST00000488897 LBX2Q6XYB7 198 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.37■□□□□ 0.85
COL16A1-215ENST00000488897 SYNPO2Q9UMS6 1093 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 CTDP1Q9Y5B0 961 aaPredicted RBP20.37■□□□□ 0.85
COL16A1-215ENST00000488897 A0A0U1RQJ8 604 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 ERVK-24P63145 666 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 SREBF2Q12772 1141 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 LONRF2Q1L5Z9 754 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 C4orf32Q8N8J7 132 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 ATRIPQ8WXE1 791 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
COL16A1-215ENST00000488897 TAB2Q9NYJ8 693 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 CALCOCO1Q9P1Z2 691 aa20.37■□□□□ 0.85
COL16A1-215ENST00000488897 CTGFP29279 349 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 OAS2P29728 719 aaKnown RBP20.36■□□□□ 0.85
COL16A1-215ENST00000488897 STAT6P42226 847 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 FAM160B2Q86V87 743 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 NCAPG2Q86XI2 1143 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 SLC35F6Q8N357 371 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 ACRBPQ8NEB7 543 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 ZSWIM4Q9H7M6 989 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 SEC63Q9UGP8 760 aaKnown RBP20.36■□□□□ 0.85
COL16A1-215ENST00000488897 PCDHA4Q9UN74 947 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 ADAMTS5Q9UNA0 930 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 PNMA6FA0A0J9YX94 578 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 ERICH4A6NGS2 130 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 OPLAHO14841 1288 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 COBLO75128 1261 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 KRT9P35527 623 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 GNAQP50148 359 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 SEMA3FQ13275 785 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 UBE2SQ16763 222 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 USP17L6PQ6QN14 398 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 MSANTD4Q8NCY6 345 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 MTMR8Q96EF0 704 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 PUF60Q9UHX1 559 aaKnown RBP20.36■□□□□ 0.85
COL16A1-215ENST00000488897 RAB21Q9UL25 225 aa20.36■□□□□ 0.85
COL16A1-215ENST00000488897 ZBED4O75132 1171 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 STAT3P40763 770 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 PRCPP42785 496 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 WHAMMP3Q1A5X7 153 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 FBXO11Q86XK2 927 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 MOV10L1Q9BXT6 1211 aaKnown RBP20.35■□□□□ 0.85
COL16A1-215ENST00000488897 ERLIN1O75477 346 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 MYL1P05976 194 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 UBXN1Q04323 297 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 DISC1Q9NRI5 854 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 TMEM260Q9NX78 707 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 ZSWIM8A7E2V4 1837 aa20.35■□□□□ 0.85
COL16A1-215ENST00000488897 MAP2K7O14733 419 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 ERCC3P19447 782 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 ERVK-9P63128 1117 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 GPS2Q13227 327 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 DTHD1Q6ZMT9 781 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 ADSSL1Q8N142 457 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 SPATC1LQ9H0A9 340 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 ANKZF1Q9H8Y5 726 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 STXBP3O00186 592 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 TUBBP07437 444 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 NAPAP54920 295 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 UBXN2AP68543 259 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 KCNB1Q14721 858 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 TRERF1Q96PN7 1200 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 UIMC1Q96RL1 719 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 GDAQ9Y2T3 454 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 DOCK3Q8IZD9 2030 aa20.34■□□□□ 0.85
COL16A1-215ENST00000488897 RNF225M0QZC1 329 aaPredicted RBP20.33■□□□□ 0.85
COL16A1-215ENST00000488897 TLR2O60603 784 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 CFBP00751 764 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 PGK2P07205 417 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 CDC25AP30304 524 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 ARHGAP25P42331 645 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 INHBEP58166 350 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 STIM1Q13586 685 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 GALNT17Q6IS24 598 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 NSMFQ6X4W1 530 aa20.33■□□□□ 0.85
COL16A1-215ENST00000488897 PARK7Q99497 189 aaKnown RBP20.33■□□□□ 0.85
COL16A1-215ENST00000488897 CCDC194A0A1B0GVG4 234 aa20.33■□□□□ 0.84
COL16A1-215ENST00000488897 A0A1W2PQC6 194 aa20.33■□□□□ 0.84
COL16A1-215ENST00000488897 EEF1GP26641 437 aaKnown RBP20.33■□□□□ 0.84
COL16A1-215ENST00000488897 PABPC4Q13310 644 aaKnown RBP eCLIP20.33■□□□□ 0.84
COL16A1-215ENST00000488897 BIN2Q9UBW5 565 aaPredicted RBP20.33■□□□□ 0.84
COL16A1-215ENST00000488897 EPN1Q9Y6I3 576 aaPredicted RBP20.33■□□□□ 0.84
COL16A1-215ENST00000488897 CTAGE15A4D2H0 777 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 ICAM1P05362 532 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 CTAGE8P0CG41 777 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 MAP2K2P36507 400 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 CTAGE6Q86UF2 777 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 CTAGE4Q8IX94 777 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 TXLNBQ8N3L3 684 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 MSL3Q8N5Y2 521 aaKnown RBP20.32■□□□□ 0.84
COL16A1-215ENST00000488897 OR8K1Q8NGG5 319 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 LZTS2Q9BRK4 669 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 AMNQ9BXJ7 453 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 PNMA3Q9UL41 463 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 PLA2G6O60733 806 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms