RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 A6NNZ2 444 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 STXBP3O00186 592 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 HNRNPDLO14979 420 aaKnown RBP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 LIG4P49917 911 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 POLGP54098 1239 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 TUBB8Q3ZCM7 444 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 HHIPL2Q6UWX4 724 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 NSRP1Q9H0G5 558 aaKnown RBP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 ZNRF3Q9ULT6 936 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 POMGNT1Q8WZA1 660 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 RMDN3Q96TC7 470 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 FEZ2Q9UHY8 353 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 BCRP11274 1271 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 NT5C2P49902 561 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-218ENST00000482171 USP14P54578 494 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 PAK2Q13177 524 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 NALCNQ8IZF0 1738 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 MRPS25P82663 173 aaKnown RBP12.35□□□□□ -0.43
SMPD4-218ENST00000482171 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 ADAT2Q7Z6V5 191 aaKnown RBP12.35□□□□□ -0.43
SMPD4-218ENST00000482171 SFR1Q86XK3 245 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 USTQ9Y2C2 406 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
SMPD4-218ENST00000482171 PRPHP41219 470 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 PTPAQ15257 358 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 MTERF2Q49AM1 385 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 HOOK3Q86VS8 718 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-218ENST00000482171 MAD2L2Q9UI95 211 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 SLIT3O75094 1523 aa12.35□□□□□ -0.43
SMPD4-218ENST00000482171 FRMD3A2A2Y4 597 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 BUB1BO60566 1050 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 MYL1P05976 194 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 UNC13DQ70J99 1090 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 PARVGQ9HBI0 331 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 RIC8AQ9NPQ8 531 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 CEP83Q9Y592 693 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 GOLGA8IPA6NC78 632 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 GOLGA8JA6NMD2 632 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 RPS6KA1Q15418 735 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 FAM133AQ8N9E0 248 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 FBF1Q8TES7 1133 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 ZNF70Q9UC06 446 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 IFT88Q13099 833 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 CCDC6Q16204 474 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 CFAP221Q4G0U5 840 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 EARS2Q5JPH6 523 aaKnown RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 KIFAP3Q92845 792 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 FBXO28Q9NVF7 368 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 SRLQ86TD4 932 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 DYDC2Q96IM9 177 aa12.34□□□□□ -0.43
SMPD4-218ENST00000482171 HERC5Q9UII4 1024 aaKnown RBP12.34□□□□□ -0.43
SMPD4-218ENST00000482171 DDTLA6NHG4 134 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 HMGCS2P54868 508 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 KCTD2Q14681 263 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 TTC16Q8NEE8 873 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 RAD54LQ92698 747 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 CNOT7Q9UIV1 285 aaKnown RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 CXCR5P32302 372 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 MTF1Q14872 753 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 KRT71Q3SY84 523 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 RSBN1LQ6PCB5 846 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 TADA2BQ86TJ2 420 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 KCNK9Q9NPC2 374 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 NPHP3-ACAD11A0A0J9YXS1 232 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 GOLGA8KD6RF30 607 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 KCNK3O14649 394 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 MFAP3LO75121 409 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 COASYQ13057 564 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms