RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	ATP1A1	P05023	1023 aa	Known RBP	10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	ASNS	P08243	561 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	SCG2	P13521	617 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	CDC25A	P30304	524 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	HOXA7	P31268	230 aa	Predicted RBP	10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	NLRP5	P59047	1200 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	HERVK_113	P62684	666 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	C12orf60	Q5U649	245 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	ANKRD23	Q86SG2	305 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	MMGT1	Q8N4V1	131 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	TRIM58	Q8NG06	486 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	CAGE1	Q8TC20	777 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	MMS19	Q96T76	1030 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	DISC1	Q9NRI5	854 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	EXOC1	Q9NV70	894 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	ZBTB21	Q9ULJ3	1066 aa		10.09	□□□□□ -0.79
SH3YL1-222	ENST00000479739	USP17L5	A8MUK1	530 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SMIM22	K7EJ46	135 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	OPA1	O60313	960 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	RHOBTB3	O94955	611 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GDF11	O95390	407 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CYP2D6	P10635	497 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	KIF5A	Q12840	1032 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PPFIA1	Q13136	1202 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PFKFB3	Q16875	520 aa	Predicted RBP	10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ICE2	Q659A1	982 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ZNF280C	Q8ND82	737 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MTR	Q99707	1265 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	WDR18	Q9BV38	432 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SELENOO	Q9BVL4	669 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	JRKL	Q9Y4A0	524 aa		10.08	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GOLGA6B	A6NDN3	693 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	USP17L12	C9JPN9	530 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	USP17L21	D6R901	530 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PLEKHA8P1	O95397	391 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	VAV2	P52735	878 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	WDR59	Q6PJI9	974 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	IRF2BP1	Q8IU81	584 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TNS4	Q8IZW8	715 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCDC155	Q8N6L0	562 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TRIM47	Q96LD4	638 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TTYH3	Q9C0H2	523 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCSER1	Q9C0I3	900 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GREB1L	Q9C091	1923 aa	Predicted RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ADGRA2	Q96PE1	1338 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CYP2D7	A0A087X1C5	515 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GOLGA6C	A6NDK9	693 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ENC1	O14682	589 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ORC4	O43929	436 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TACC1	O75410	805 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PRDM1	O75626	825 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GOLGA6D	P0CG33	693 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	IDE	P14735	1019 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TRIM21	P19474	475 aa	Known RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	KIF5B	P33176	963 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SPP2	Q13103	211 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SPA17	Q15506	151 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TAF1C	Q15572	869 aa	Predicted RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SBK1	Q52WX2	424 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SH3D19	Q5HYK7	790 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GALNT17	Q6IS24	598 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PIK3AP1	Q6ZUJ8	805 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	FASTKD5	Q7L8L6	764 aa	Known RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AEN	Q8WTP8	325 aa	Known RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	STAM	Q92783	540 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GOLGA6A	Q9NYA3	693 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GDA	Q9Y2T3	454 aa		10.07	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ROBO3	Q96MS0	1386 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ATXN2	Q99700	1313 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PDHX	O00330	501 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EBAG9	O00559	213 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TLR2	O60603	784 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GH2	P01242	217 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TFRC	P02786	760 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EPB41	P11171	864 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TCP1	P17987	556 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TNFRSF8	P28908	595 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MCM7	P33993	719 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GGCX	P38435	758 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PRPH	P41219	470 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CERKL	Q49MI3	558 aa	Predicted RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	COBLL1	Q53SF7	1204 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ALS2CL	Q60I27	953 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EMB	Q6PCB8	327 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DTHD1	Q6ZMT9	781 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	C16orf86	Q6ZW13	317 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TADA2B	Q86TJ2	420 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SPATS2	Q86XZ4	545 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SUGP1	Q8IWZ8	645 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SLC44A5	Q8NCS7	719 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DYNLL2	Q96FJ2	89 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ERGIC2	Q96RQ1	377 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TUBGCP2	Q9BSJ2	902 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ZFYVE28	Q9HCC9	887 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	KBTBD4	Q9NVX7	518 aa		10.06	□□□□□ -0.8

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