RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 IQSEC3Q9UPP2 1182 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 IL16Q14005 1332 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ZBBXA8MT70 800 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 C6orf229H3BNL8 230 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 KRT37O76014 449 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 FNTAP49354 379 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 KIAA1841Q6NSI8 718 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 SLC25A24Q6NUK1 477 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 TLK2Q86UE8 772 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 OOSP2Q86WS3 158 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ANKRD44Q8N8A2 993 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 EURLQ9NYK6 297 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 RRP7AQ9Y3A4 280 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 RWDD3Q9Y3V2 267 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 CCT5P48643 541 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 PKN2Q16513 984 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 RTN1Q16799 776 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 TAF1BQ53T94 588 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 WDR93Q6P2C0 686 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ARMCX2Q7L311 632 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ADCK1Q86TW2 530 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 TAGAPQ8N103 731 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 GMEB1Q9Y692 573 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 TGM3Q08188 693 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 C10orf76Q5T2E6 689 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 IGSF22Q8N9C0 903 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 HIPK4Q8NE63 616 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ZNF555Q8NEP9 628 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ZFYVE19Q96K21 471 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 UNKQ9C0B0 810 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 RPAP3Q9H6T3 665 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 BABAM1Q9NWV8 329 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 TLK1Q9UKI8 766 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 SNX2O60749 519 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 RPSAP08865 295 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 RXRAP19793 462 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ITIH2P19823 946 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 PSMC6P62333 389 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 AMPD2Q01433 879 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 OCRLQ01968 901 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ITKQ08881 620 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 PCGF5Q86SE9 256 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 TTC6Q86TZ1 520 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 IQUBQ8NA54 791 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 PLEKHA8Q96JA3 519 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 FAM161BQ96MY7 647 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 GDPD2Q9HCC8 539 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ADD3Q9UEY8 706 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 FAM32AQ9Y421 112 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 RAD54L2Q9Y4B4 1467 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 CCDC169A6NNP5 214 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 STK25O00506 426 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 RGS16O15492 202 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 MAP2K2P36507 400 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ZKSCAN8Q15776 578 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 DPY19L2Q6NUT2 758 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ARMC6Q6NXE6 501 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 RNASE11Q8TAA1 199 aaKnown RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 MPHOSPH9Q99550 1183 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 C6orf203Q9P0P8 240 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 CLCA2Q9UQC9 943 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 CFAP73A6NFT4 308 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PGK2P07205 417 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 INHBAP08476 426 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 ZNF3P17036 446 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CASP2P42575 452 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CASP8Q14790 479 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 RAPH1Q70E73 1250 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 YAF2Q8IY57 180 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 LRRC46Q96FV0 321 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 AVENQ9NQS1 362 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 DNAJC28Q9NX36 388 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PASKQ96RG2 1323 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CUTAO60888 179 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CASP1P29466 404 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PPP2R3AQ06190 1150 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 KYAT1Q16773 422 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 AASDHQ4L235 1098 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 USP39Q53GS9 565 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 ALS2CLQ60I27 953 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PYHIN1Q6K0P9 492 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 C4orf50Q6ZRC1 276 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CLYBLQ8N0X4 340 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 POLE4Q9NR33 117 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PCDH10Q9P2E7 1040 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SUGT1Q9Y2Z0 365 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 NKTRP30414 1462 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 TDRD9Q8NDG6 1382 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 ARHGEF35A5YM69 484 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 TTLL8A6PVC2 850 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CENPXA8MT69 81 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 FOXP2O15409 715 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 H2AFYO75367 372 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 MFN2O95140 757 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 XRCC5P13010 732 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 ZNF18P17022 549 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 IMPG1Q17R60 797 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 ACOT12Q8WYK0 555 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 HPS3Q969F9 1004 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms