RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SRGAP3O43295 1099 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 DIAPH1O60610 1272 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TBCAO75347 108 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 STAM2O75886 525 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TGFB3P10600 412 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 EPXP11678 715 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 BMP4P12644 408 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 HCLS1P14317 486 aaPredicted RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 BMP6P22004 513 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 IFFO1Q0D2I5 559 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 PTPN14Q15678 1187 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 PPP2R5EQ16537 467 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 EMC10Q5UCC4 262 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 MIS18BP1Q6P0N0 1132 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 SPATC1Q76KD6 591 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 RPAP2Q8IXW5 612 aaPredicted RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 REXO1Q8N1G1 1221 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 THAP3Q8WTV1 239 aaPredicted RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 LRRC45Q96CN5 670 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TMX3Q96JJ7 454 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 MAML3Q96JK9 1138 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 CDC5LQ99459 802 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 MUC3BQ9H195 1237 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 BHMT2Q9H2M3 363 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 ZWILCHQ9H900 591 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBGCP4Q9UGJ1 667 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TMCC3Q9ULS5 477 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 REREQ9P2R6 1566 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 CASKIN1Q8WXD9 1431 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 IQSEC2Q5JU85 1478 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 ARHGAP35Q9NRY4 1499 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 GOLGA6L10A0A0M3HER8 536 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 B2RBV5 119 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 BOLA2-SMG1P6H3BVE0 249 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 PDE2AO00408 941 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 MTA2O94776 668 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 MBD4O95243 580 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 MAP3K6O95382 1288 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 CAVIN2O95810 425 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 THBS1P07996 1170 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 HOXD8P13378 290 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 ENPP1P22413 925 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 MATR3P43243 847 aaKnown RBP eCLIP6.64□□□□□ -1.358e-7■■■■■ 31.9
ECHDC1-215ENST00000475319 BTG3Q14201 252 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 ARHGEF6Q15052 776 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 INAQ16352 499 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 COBLL1Q53SF7 1204 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 THOC7Q6I9Y2 204 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 RUFY4Q6ZNE9 571 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 DHX32Q7L7V1 743 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 RAB44Q7Z6P3 723 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 NAF1Q96HR8 494 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 TSC22D3Q99576 134 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 LRRC27Q9C0I9 530 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC68Q9H2F9 335 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 MRPL46Q9H2W6 279 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 SEPT10Q9P0V9 454 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 CIDEBQ9UHD4 219 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 PCSK1NQ9UHG2 260 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 TMCO1Q9UM00 188 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 POLR1AO95602 1720 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 NPATQ14207 1427 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 PPIP5K1Q6PFW1 1433 aa6.64□□□□□ -1.35
ECHDC1-215ENST00000475319 KDM5CP41229 1560 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 A6NNZ2 444 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ABLIM1O14639 778 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ZEB2O60315 1214 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 DDAH1O94760 285 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 LUC7L3O95232 432 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 PDGFRBP09619 1106 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 PARP1P09874 1014 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TSPY4P0CV99 314 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TSPY10P0CW01 314 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC166P0CW27 439 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ALOX15P16050 662 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 CCNCP24863 283 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TCF7P36402 384 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 CASP7P55210 303 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBA1BP68363 451 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 SPEM2Q0P670 501 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 WASHC5Q12768 1159 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 WTAPQ15007 396 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 SNCBQ16143 134 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBB8Q3ZCM7 444 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ARHGAP29Q52LW3 1261 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 SPDYCQ5MJ68 293 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC122Q5T0U0 273 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 MSL1Q68DK7 614 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBA1AQ71U36 451 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ZBTB8BQ8NAP8 495 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 RBBP8NLQ8NC74 664 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 GCC1Q96CN9 775 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 VMP1Q96GC9 406 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 SLC30A3Q99726 388 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 SLC7A5P2Q9GIP4 190 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms