RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PACSIN1Q9BY11 444 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 PDGFDQ9GZP0 370 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-221ENST00000469415 PPIP5K2O43314 1243 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 RETREG2Q8NC44 543 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 ZDHHC15Q96MV8 337 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 L1RE1Q9UN81 338 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 MAST2Q6P0Q8 1798 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 hCG_1984214I3L0E3 225 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 TACC1O75410 805 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 FGFR1OPO95684 399 aaKnown RBP19.69■□□□□ 0.74
MCF2L-221ENST00000469415 SLC9A1P19634 815 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 LRRC63Q05C16 580 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 RBM26Q5T8P6 1007 aaKnown RBP19.69■□□□□ 0.74
MCF2L-221ENST00000469415 ZNF713Q8N859 430 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-221ENST00000469415 RDH13Q8NBN7 331 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 MTMR8Q96EF0 704 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 REEP2Q9BRK0 252 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 MYH10P35580 1976 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 ADAMTSL1Q8N6G6 1762 aa19.69■□□□□ 0.74
MCF2L-221ENST00000469415 EML1O00423 815 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 KIAA1755Q5JYT7 1200 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 CCDC181Q5TID7 509 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-221ENST00000469415 RABEP2Q9H5N1 569 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 FBXO28Q9NVF7 368 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-221ENST00000469415 KIF20AO95235 890 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 GCNT3O95395 438 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 BMP3P12645 472 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 NT5C2P49902 561 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 GJB7Q6PEY0 223 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 CCDC170Q8IYT3 715 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 BAP1Q92560 729 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 DHX36Q9H2U1 1008 aaKnown RBP19.68■□□□□ 0.74
MCF2L-221ENST00000469415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.74
MCF2L-221ENST00000469415 ADAM21Q9UKJ8 722 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 DNM3Q9UQ16 869 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 TAF1LQ8IZX4 1826 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 CASP4P49662 377 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 MSANTD4Q8NCY6 345 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 NT5C3AQ9H0P0 336 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 ZBTB21Q9ULJ3 1066 aa19.68■□□□□ 0.74
MCF2L-221ENST00000469415 TLR2O60603 784 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 SMCHD1A6NHR9 2005 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 NHSQ6T4R5 1651 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 KCNH2Q12809 1159 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 ZC2HC1CQ53FD0 456 aaPredicted RBP19.67■□□□□ 0.74
MCF2L-221ENST00000469415 HSP90B2PQ58FF3 399 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 LRRC1Q9BTT6 524 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 RUSC1Q9BVN2 902 aa19.67■□□□□ 0.74
MCF2L-221ENST00000469415 MSH4O15457 936 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 USP14P54578 494 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 SFMBT2Q5VUG0 894 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 GLIS2Q9BZE0 524 aaPredicted RBP19.66■□□□□ 0.74
MCF2L-221ENST00000469415 DMGDHQ9UI17 866 aaKnown RBP19.66■□□□□ 0.74
MCF2L-221ENST00000469415 SPAG5Q96R06 1193 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 SH2D4AQ9H788 454 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 PRR12Q9ULL5 1215 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 SUGT1Q9Y2Z0 365 aa19.66■□□□□ 0.74
MCF2L-221ENST00000469415 ESYT3A0FGR9 886 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 NMT1P30419 496 aaKnown RBP19.65■□□□□ 0.74
MCF2L-221ENST00000469415 PPP1R2P41236 205 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 DGKZQ13574 1117 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 STRIP1Q5VSL9 837 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 TMEM179Q6ZVK1 233 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 EHBP1Q8NDI1 1231 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 LRRC27Q9C0I9 530 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 HOMER2Q9NSB8 354 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 PLIN4Q96Q06 1357 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 A0A087X0T9 212 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 TMCO5BA8MYB1 307 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 CETN3O15182 167 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 NOL4O94818 638 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 FAM228BP0C875 321 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 GCFC2P16383 781 aaKnown RBP19.65■□□□□ 0.74
MCF2L-221ENST00000469415 KLHL30Q0D2K2 578 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 KCNMB3Q9NPA1 279 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-221ENST00000469415 RAB21Q9UL25 225 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 SPATA31C1P0DKV0 1188 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 EHHADHQ08426 723 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 KIAA0753Q2KHM9 967 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 PAPD7Q5XG87 772 aaKnown RBP19.65■□□□□ 0.74
MCF2L-221ENST00000469415 NYAP2Q9P242 653 aa19.65■□□□□ 0.74
MCF2L-221ENST00000469415 CDK5RAP2Q96SN8 1893 aa19.64■□□□□ 0.74
MCF2L-221ENST00000469415 NOP2P46087 812 aaKnown RBP19.64■□□□□ 0.73
MCF2L-221ENST00000469415 HNRNPH2P55795 449 aaKnown RBP19.64■□□□□ 0.73
MCF2L-221ENST00000469415 GIT2Q14161 759 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 DNAJC21Q5F1R6 531 aaKnown RBP19.64■□□□□ 0.73
MCF2L-221ENST00000469415 KDM3AQ9Y4C1 1321 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 YDJCA8MPS7 323 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 POTEB2H3BUK9 544 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 MAP2K7O14733 419 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 KLRC1P26715 233 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 SLC12A3P55017 1021 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 ZCWPW2Q504Y3 356 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 PPP1R18Q6NYC8 613 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms