RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ATP2B3Q16720 1220 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 CCDC152Q4G0S7 254 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 POTEAQ6S8J7 498 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 PADI6Q6TGC4 694 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 SYNE3Q6ZMZ3 975 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 PTF1AQ7RTS3 328 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 FAM89AQ96GI7 184 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 RADILQ96JH8 1075 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 PANK2Q9BZ23 570 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 TRMT112Q9UI30 125 aaKnown RBP8.69□□□□□ -1.02
BRCC3-208ENST00000453705 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 DDX60LQ5H9U9 1706 aaKnown RBP8.69□□□□□ -1.02
BRCC3-208ENST00000453705 ANKRD31Q8N7Z5 1873 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 NID2Q14112 1375 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 PDPK1O15530 556 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 EYA4O95677 639 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 CAP2P40123 477 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 NT5C2P49902 561 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 SLC12A2P55011 1212 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 ATP2B2Q01814 1243 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 IFRD2Q12894 506 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-208ENST00000453705 SLC27A3Q5K4L6 730 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 DPY19L2Q6NUT2 758 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 DSTYKQ6XUX3 929 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-208ENST00000453705 FAM227BQ96M60 508 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 HINFPQ9BQA5 517 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 TARS2Q9BW92 718 aaKnown RBP8.69□□□□□ -1.02
BRCC3-208ENST00000453705 GREM2Q9H772 168 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 KIAA1586Q9HCI6 787 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-208ENST00000453705 CYP46A1Q9Y6A2 500 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 OPLAHO14841 1288 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 CPP00450 1065 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 XPAP23025 273 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 RPS6KB1P23443 525 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 ORC1Q13415 861 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 MTERF2Q49AM1 385 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 FAAH2Q6GMR7 532 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 SYDE1Q6ZW31 735 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 MFSD3Q96ES6 412 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 SPON2Q9BUD6 331 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 PUS3Q9BZE2 481 aaKnown RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 LUC7L2Q9Y383 392 aaKnown RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 C2orf81A6NN90 581 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 H3BRJ5 948 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 DYNC1I1O14576 645 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 HOXA10P31260 410 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 PLIN5Q00G26 463 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 HEATR6Q6AI08 1181 aaKnown RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 SH3RF1Q7Z6J0 888 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 NLRP14Q86W24 1093 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 NRSN1Q8IZ57 195 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 SPATA5Q8NB90 893 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 CCT6BQ92526 530 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 BCL2L12Q9HB09 334 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 IFT80Q9P2H3 777 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 PDP2Q9P2J9 529 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 ZDHHC9Q9Y397 364 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 AK5Q9Y6K8 562 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 TCHHQ07283 1943 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 ZNF646O15015 1829 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-208ENST00000453705 CDK5RAP2Q96SN8 1893 aa8.68□□□□□ -1.02
BRCC3-208ENST00000453705 P4HA2O15460 535 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 KIAA0754O94854 1291 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 BAG4O95429 457 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 AK2P54819 239 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 EIF2B5Q13144 721 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 SMC1AQ14683 1233 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 DDR2Q16832 855 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 ABCB5Q2M3G0 1257 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 C15orf52Q6ZUT6 534 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 ZNF589Q86UQ0 364 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 IQCA1Q86XH1 822 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 TSEN2Q8NCE0 465 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 HPS3Q969F9 1004 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 CHCHD6Q9BRQ6 235 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 GRPEL1Q9HAV7 217 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 AAASQ9NRG9 546 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 SAP30BPQ9UHR5 308 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 CNPY2Q9Y2B0 182 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 MAST3O60307 1309 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 AKR1B15C9JRZ8 316 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 MSL3P1P0C860 447 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 PREPLQ4J6C6 727 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 ISM2Q6H9L7 571 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 EPM2AIP1Q7L775 607 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 BICD2Q8TD16 824 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 ERCC4Q92889 916 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 BHMTQ93088 406 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 LLPHQ9BRT6 129 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms