RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 PURAQ00577 322 aaKnown RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 MDM2Q00987 491 aaPredicted RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 SETQ01105 290 aaPredicted RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 MTMR1Q13613 665 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 LAMC2Q13753 1193 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 PRR16Q569H4 304 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 MOXD1Q6UVY6 613 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 NIPA1Q7RTP0 329 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 SH3RF1Q7Z6J0 888 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 PLA2G4DQ86XP0 818 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 EMID1Q96A84 441 aaPredicted RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 MTG1Q9BT17 334 aaPredicted RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 PRDM5Q9NQX1 630 aaPredicted RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
RFX3-207ENST00000449190 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 MTMR6Q9Y217 621 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 UBIAD1Q9Y5Z9 338 aa10.4□□□□□ -0.74
RFX3-207ENST00000449190 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.75
RFX3-207ENST00000449190 GRIN2DO15399 1336 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 CYP3A7-CYP3A51PA0A087WV96 503 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 MEIS1O00470 390 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 CD4P01730 458 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 ZSCAN22P10073 491 aaPredicted RBP10.39□□□□□ -0.75
RFX3-207ENST00000449190 RAG1P15918 1043 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 CYP3A7P24462 503 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 ICAM3P32942 547 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 ARHGAP1Q07960 439 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 NEDD9Q14511 834 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 FOXD4L5Q5VV16 416 aaPredicted RBP10.39□□□□□ -0.75
RFX3-207ENST00000449190 PPP4R3AQ6IN85 833 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 FERMT3Q86UX7 667 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 FAM126BQ8IXS8 530 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 DHX37Q8IY37 1157 aaKnown RBP10.39□□□□□ -0.75
RFX3-207ENST00000449190 AFG1LQ8WV93 481 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 FOXD4L4Q8WXT5 416 aaPredicted RBP10.39□□□□□ -0.75
RFX3-207ENST00000449190 BADQ92934 168 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
RFX3-207ENST00000449190 INPP4AQ96PE3 977 aaPredicted RBP10.39□□□□□ -0.75
RFX3-207ENST00000449190 SDF4Q9BRK5 362 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 CENPFP49454 3210 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 MYH6P13533 1939 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
RFX3-207ENST00000449190 KIF28PB7ZC32 967 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 PPFIA4O75335 1185 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 TIMP1P01033 207 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 SUPT20HL2P0C7V6 817 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 ITGB5P18084 799 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 FXR1P51114 621 aaKnown RBP eCLIP10.38□□□□□ -0.75
RFX3-207ENST00000449190 PSMC6P62333 389 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
RFX3-207ENST00000449190 ORC2Q13416 577 aaPredicted RBP10.38□□□□□ -0.75
RFX3-207ENST00000449190 ZNF174Q15697 407 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 DGKDQ16760 1214 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 Q4G0T1 1027 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 EARS2Q5JPH6 523 aaKnown RBP10.38□□□□□ -0.75
RFX3-207ENST00000449190 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 CELF3Q5SZQ8 465 aaKnown RBP10.38□□□□□ -0.75
RFX3-207ENST00000449190 MYSM1Q5VVJ2 828 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 TDHQ8IZJ6 230 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 CRYGNQ8WXF5 182 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 ZNF396Q96N95 335 aaPredicted RBP10.38□□□□□ -0.75
RFX3-207ENST00000449190 SENP7Q9BQF6 1050 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 ZNF577Q9BSK1 485 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 KCNH7Q9NS40 1196 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 TBX21Q9UL17 535 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 CEP131Q9UPN4 1083 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 LCTP09848 1927 aa10.38□□□□□ -0.75
RFX3-207ENST00000449190 FAM86B1E9PN63 330 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 NEMFO60524 1076 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 TDP2O95551 362 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 MMP3P08254 477 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 FAM86B2P0C5J1 330 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 ARP10275 920 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 ITGB8P26012 769 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 MCM7P33993 719 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 SP2Q02086 613 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 RESTQ13127 1097 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 CALCRLQ16602 461 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 NBPF20Q3BBV1 942 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 LRIT3Q3SXY7 679 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 MFSD5Q6N075 450 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 NFRKBQ6P4R8 1299 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 SLFN12Q8IYM2 578 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 PPTC7Q8NI37 304 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 CYP2W1Q8TAV3 490 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 FAM20AQ96MK3 541 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
RFX3-207ENST00000449190 TBC1D22BQ9NU19 505 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 PKD2L1Q9P0L9 805 aa10.37□□□□□ -0.75
RFX3-207ENST00000449190 TNRC18O15417 2968 aaPredicted RBP10.37□□□□□ -0.75
RFX3-207ENST00000449190 IGLV3-22A0A075B6J6 115 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
RFX3-207ENST00000449190 NOP56O00567 594 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms