RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MEA1Q16626 185 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 MAN2A1Q16706 1144 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 ZCWPW2Q504Y3 356 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 ZC2HC1CQ53FD0 456 aaPredicted RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 ERGIC2Q96RQ1 377 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 ZNHIT6Q9NWK9 470 aaKnown RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 CNTNAP1P78357 1384 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 STAT2P52630 851 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 POLR2FP61218 127 aaKnown RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 AMPD2Q01433 879 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 RSBN1LQ6PCB5 846 aaPredicted RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 FAM114A1Q8IWE2 563 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 CENPFP49454 3210 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 VSNL1P62760 191 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 GIT2Q14161 759 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 DEF6Q9H4E7 631 aa16.38■□□□□ 0.21
SF1-211ENST00000448404 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
SF1-211ENST00000448404 TLR2O60603 784 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 NOL4O94818 638 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 ARP10275 920 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
SF1-211ENST00000448404 ADAM9Q13443 819 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 COG2Q14746 738 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 TERF2Q15554 542 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 BAP1Q92560 729 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 GMCL1Q96IK5 515 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 COL4A3BPQ9Y5P4 624 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 TMEM150BA6NC51 233 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 AKR1B10O60218 316 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
SF1-211ENST00000448404 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
SF1-211ENST00000448404 USP11P51784 963 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 KIF11P52732 1056 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 GJB7Q6PEY0 223 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 EIF2AK1Q9BQI3 630 aaKnown RBP16.37■□□□□ 0.21
SF1-211ENST00000448404 JADE2Q9NQC1 790 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■■■ 260.6
SF1-211ENST00000448404 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
SF1-211ENST00000448404 ABCB11O95342 1321 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 KCNA3P22001 575 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 NR2F2P24468 414 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 INPP5BP32019 993 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 SREBF1P36956 1147 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 RASSF7Q02833 373 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 DCAF17Q5H9S7 520 aaPredicted RBP16.36■□□□□ 0.21
SF1-211ENST00000448404 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 DYDC2Q96IM9 177 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 KCTD10Q9H3F6 313 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 SLC9A1P19634 815 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 HDLBPQ00341 1268 aaKnown RBP16.36■□□□□ 0.21
SF1-211ENST00000448404 FKBP3Q00688 224 aaKnown RBP16.36■□□□□ 0.21
SF1-211ENST00000448404 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 GPR161Q8N6U8 529 aaKnown RBP16.36■□□□□ 0.21
SF1-211ENST00000448404 IL31RAQ8NI17 732 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 TSG101Q99816 390 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 IFIH1Q9BYX4 1025 aaKnown RBP16.36■□□□□ 0.21
SF1-211ENST00000448404 MYH10P35580 1976 aa16.36■□□□□ 0.21
SF1-211ENST00000448404 ENTPD3O75355 529 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
SF1-211ENST00000448404 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 COG1Q8WTW3 980 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 PACSIN1Q9BY11 444 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 IGLV3-22A0A075B6J6 115 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 LRRC63Q05C16 580 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 COL20A1Q9P218 1284 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 AJAP1Q9UKB5 411 aaPredicted RBP16.35■□□□□ 0.21
SF1-211ENST00000448404 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 PCDHA13Q9Y5I0 950 aa16.35■□□□□ 0.21
SF1-211ENST00000448404 CYP3A7-CYP3A51PA0A087WV96 503 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 CTAGE15A4D2H0 777 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 NFIBO00712 420 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 N4BP1O75113 896 aaKnown RBP16.34■□□□□ 0.21
SF1-211ENST00000448404 GCNT3O95395 438 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 CTAGE8P0CG41 777 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 CYP3A7P24462 503 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 CYLC1P35663 651 aaPredicted RBP16.34■□□□□ 0.21
SF1-211ENST00000448404 RNASE9P60153 205 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms