RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 RETREG2Q8NC44 543 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 NOC4LQ9BVI4 516 aaKnown RBP20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 ADAMTS5Q9UNA0 930 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 UBIAD1Q9Y5Z9 338 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 MYPNQ86TC9 1320 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 PAPPA2Q9BXP8 1791 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 SLITRK3O94933 977 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 FXR1P51114 621 aaKnown RBP eCLIP20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 LRRC41Q15345 812 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 PRAMEF18Q5VWM3 479 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 CPLX3Q8WVH0 158 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 ATG4CQ96DT6 458 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 DYDC2Q96IM9 177 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 CEP63Q96MT8 703 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 TRERF1Q96PN7 1200 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 UNC45AQ9H3U1 944 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 RGL1Q9NZL6 768 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 TMOD4Q9NZQ9 345 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 PPP2R2CQ9Y2T4 447 aa20.93■□□□□ 0.94
SEMA3D-202ENST00000444867 NPHP3-ACAD11A0A0J9YXS1 232 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 DYNC1I1O14576 645 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 GAP43P17677 238 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 ITGB5P18084 799 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 FKBP3Q00688 224 aaKnown RBP20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 FKBP15Q5T1M5 1219 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 XRRA1Q6P2D8 792 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 LRRC55Q6ZSA7 311 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 TMTC1Q8IUR5 882 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 REXO1L1PQ8IX06 675 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 REPS2Q8NFH8 660 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 KIF18AQ8NI77 898 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 NACC1Q96RE7 527 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 ERGIC2Q96RQ1 377 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 REEP2Q9BRK0 252 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 BHMT2Q9H2M3 363 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 JADE2Q9NQC1 790 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 ABHD10Q9NUJ1 306 aa20.92■□□□□ 0.94
SEMA3D-202ENST00000444867 B4DLN1 442 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 PES1O00541 588 aaKnown RBP20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 ATP2A1O14983 1001 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 GNA14O95837 355 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 HMGCS2P54868 508 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 RPS6P62753 249 aaKnown RBP20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 TBC1D8BQ0IIM8 1120 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 COG2Q14746 738 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 MAN2A1Q16706 1144 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 TKFCQ3LXA3 575 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 SH3D19Q5HYK7 790 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 MIIPQ5JXC2 388 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 RNF207Q6ZRF8 634 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 GLIS3Q8NEA6 775 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 RBM46Q8TBY0 533 aaKnown RBP20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 KCND2Q9NZV8 630 aa20.91■□□□□ 0.94
SEMA3D-202ENST00000444867 LOC285556D6RIA3 1793 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 TBCAO75347 108 aaKnown RBP20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 CTTNQ14247 550 aaKnown RBP20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 VWA3BQ502W6 1294 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 FIGNQ5HY92 759 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 CATSPERGQ6ZRH7 1159 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 TPH2Q8IWU9 490 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 KCNH7Q9NS40 1196 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 HOMER2Q9NSB8 354 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 RNF146Q9NTX7 359 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 CAPN11Q9UMQ6 739 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 AFG3L2Q9Y4W6 797 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 COL4A3BPQ9Y5P4 624 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 PTPRFP10586 1907 aa20.9■□□□□ 0.94
SEMA3D-202ENST00000444867 RIOK3O14730 519 aaKnown RBP20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 CHMP2AO43633 222 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 KRT9P35527 623 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 EDRF1Q3B7T1 1238 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 RINT1Q6NUQ1 792 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 EPM2AIP1Q7L775 607 aaPredicted RBP20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 ZC3H3Q8IXZ2 948 aaKnown RBP20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 IL31RAQ8NI17 732 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 SCFD1Q8WVM8 642 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 TAAR1Q96RJ0 339 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 KCTD10Q9H3F6 313 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 AGO4Q9HCK5 861 aaKnown RBP20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 TBC1D22BQ9NU19 505 aa20.89■□□□□ 0.94
SEMA3D-202ENST00000444867 OTOFQ9HC10 1997 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 DDNO94850 711 aaPredicted RBP20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 CCDC175P0C221 793 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 MAP3K9P80192 1104 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 CACNB1Q02641 598 aaPredicted RBP20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 PGM5Q15124 567 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 CYP26C1Q6V0L0 522 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 SLC30A10Q6XR72 485 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 DCPSQ96C86 337 aaKnown RBP20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 RUSC1Q9BVN2 902 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 ZHX3Q9H4I2 956 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 PXMP2Q9NR77 195 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 TBC1D7Q9P0N9 293 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 RNF181Q9P0P0 153 aa20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 LUC7L2Q9Y383 392 aaKnown RBP20.89■□□□□ 0.93
SEMA3D-202ENST00000444867 A0A1W2PQJ5 194 aa20.88■□□□□ 0.93
SEMA3D-202ENST00000444867 TRAF5O00463 557 aa20.88■□□□□ 0.93
SEMA3D-202ENST00000444867 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms