RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
LTBR-204ENST00000444814 PDLIM7Q9NR12 457 aa13.88□□□□□ -0.19
LTBR-204ENST00000444814 ERAP1Q9NZ08 941 aa13.88□□□□□ -0.19
LTBR-204ENST00000444814 DDX25Q9UHL0 483 aaKnown RBP13.88□□□□□ -0.19
LTBR-204ENST00000444814 CYP3A7-CYP3A51PA0A087WV96 503 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 A0A1W2PPC1 479 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 H3BQV1 296 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 M0R2N6 131 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 KIAA0355O15063 1070 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 SORBS3O60504 671 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 GAS7O60861 476 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 ARP10275 920 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 CYP3A7P24462 503 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 SFNP31947 248 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 TCF7P36402 384 aaPredicted RBP13.87□□□□□ -0.19
LTBR-204ENST00000444814 PSMC6P62333 389 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
LTBR-204ENST00000444814 INF2Q27J81 1249 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 LETM2Q2VYF4 491 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
LTBR-204ENST00000444814 PPP4R3AQ6IN85 833 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 ZNF746Q6NUN9 644 aaPredicted RBP13.87□□□□□ -0.19
LTBR-204ENST00000444814 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
LTBR-204ENST00000444814 BACH1O14867 736 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 TBX3O15119 743 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 ATP9AO75110 1047 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
LTBR-204ENST00000444814 PSAPP07602 524 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 ZNF286BP0CG31 522 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 JAK3P52333 1124 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 ORC2Q13416 577 aaPredicted RBP13.86□□□□□ -0.19
LTBR-204ENST00000444814 HSCBQ8IWL3 235 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 SLFN12Q8IYM2 578 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 FBXO18Q8NFZ0 1043 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 RDM1Q8NG50 284 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 FAM20AQ96MK3 541 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 SAMM50Q9Y512 469 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 EMSYQ7Z589 1322 aa13.86□□□□□ -0.19
LTBR-204ENST00000444814 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 C17orf102A2RUQ5 167 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 CCNT1O60563 726 aaKnown RBP13.85□□□□□ -0.19
LTBR-204ENST00000444814 DKC1O60832 514 aaKnown RBP eCLIP13.85□□□□□ -0.19
LTBR-204ENST00000444814 TIMP1P01033 207 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 HSP90AA1P07900 732 aaKnown RBP13.85□□□□□ -0.19
LTBR-204ENST00000444814 SYN1P17600 705 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 PTGS1P23219 599 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 ACTR2P61160 394 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 FAAP100Q0VG06 881 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.19
LTBR-204ENST00000444814 PTGISQ16647 500 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 LRCH2Q5VUJ6 765 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 PLPPR4Q7Z2D5 763 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 CYP2W1Q8TAV3 490 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 CAGE1Q8TC20 777 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 C16orf70Q9BSU1 422 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 GTF2IRD1Q9UHL9 959 aa13.85□□□□□ -0.19
LTBR-204ENST00000444814 RRN3P2A6NIE6 340 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
LTBR-204ENST00000444814 HAS3O00219 553 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 B4GALT4O60513 344 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 CD4P01730 458 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 BMP8BP34820 402 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 TRAPPC10P48553 1259 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 STAT5BP51692 787 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 FOSBP53539 338 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 NPY5RQ15761 445 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 RSPH3Q86UC2 560 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 FAM167AQ96KS9 214 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 UBE2OQ9C0C9 1292 aaKnown RBP13.84□□□□□ -0.19
LTBR-204ENST00000444814 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
LTBR-204ENST00000444814 TBX21Q9UL17 535 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 NRCAMQ92823 1304 aa13.84□□□□□ -0.19
LTBR-204ENST00000444814 BTBD18B2RXH4 712 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 K7ELQ4 463 aaPredicted RBP13.83□□□□□ -0.19
LTBR-204ENST00000444814 MAGEA10P43363 369 aaPredicted RBP13.83□□□□□ -0.19
LTBR-204ENST00000444814 FPGSQ05932 587 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 ST3GAL1Q11201 340 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 PTK7Q13308 1070 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 RPUSD2Q8IZ73 545 aaKnown RBP13.83□□□□□ -0.19
LTBR-204ENST00000444814 KAT2BQ92831 832 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 INTS4Q96HW7 963 aaKnown RBP13.83□□□□□ -0.19
LTBR-204ENST00000444814 MBOAT7Q96N66 472 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 ZNF302Q9NR11 478 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 HDAC6Q9UBN7 1215 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.19
LTBR-204ENST00000444814 GRIN2DO15399 1336 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 MSH4O15457 936 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 CAND2O75155 1236 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 LGR5O75473 907 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 PFKMP08237 780 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 GJB2P29033 226 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 RFC2P35250 354 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 NR5A1Q13285 461 aa13.83□□□□□ -0.2
LTBR-204ENST00000444814 ITGB3BPQ13352 177 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms