RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 NBPF11Q86T75 865 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 ZBED2Q9BTP6 218 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 YDJCA8MPS7 323 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 PSMD2Q13200 908 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 MAPK6Q16659 721 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 ZBTB33Q86T24 672 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 RNF34Q969K3 372 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 INHBEP58166 350 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 FKBP1BP68106 108 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 ANKRD36BP1Q96IX9 119 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 A0A087WWV3 80 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 ESYT2A0FGR8 921 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 MAFGO15525 162 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 PTPRAP18433 802 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 SPATA1Q5VX52 437 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 ZNF579Q8NAF0 562 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 MTRQ99707 1265 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 ZMYND12Q9H0C1 365 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
SMARCA4-204ENST00000444061 GSTTP1A0A1W2PQM5 241 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 E9PMD0 336 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 EEF2KMTQ96G04 330 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 TAAR1Q96RJ0 339 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 NAA15Q9BXJ9 866 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 SFI1A8K8P3 1242 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 NFKBIEO00221 500 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 DDIT3P35638 169 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 PSMC2P35998 433 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 OSTNP61366 133 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 FKBP3Q00688 224 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 PPIL2Q13356 520 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 CACTINQ8WUQ7 758 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 EIF2AK1Q9BQI3 630 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 KATNAL1Q9BW62 490 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 GOLGA6L10A6NI86 522 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 DSG3P32926 999 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 HOOK3Q86VS8 718 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 FAM186BQ8IYM0 893 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 P2RX5Q93086 422 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 SPATC1LQ9H0A9 340 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 PCIF1Q9H4Z3 704 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.07
SMARCA4-204ENST00000444061 POTEFA5A3E0 1075 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 POTEIP0CG38 1075 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 NEFHP12036 1026 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 SLFN12LQ6IEE8 588 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 KIAA1841Q6NSI8 718 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 RGMBQ6NW40 437 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 POTEGQ6S5H5 508 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 POTEEQ6S8J3 1075 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 SMARCAD1Q9H4L7 1026 aa15.46■□□□□ 0.06
SMARCA4-204ENST00000444061 GOLGA6L10A0A0M3HER8 536 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 CLIC2O15247 247 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 XRCC6P12956 609 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 TFAMQ00059 246 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 KLHL30Q0D2K2 578 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 SEC23AQ15436 765 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 GNASQ5JWF2 1037 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 MED10Q9BTT4 135 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 LSM14BQ9BX40 385 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 FAM184BQ9ULE4 1060 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 HOXA7P31268 230 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 PPP2R3AQ06190 1150 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 PPM1KQ8N3J5 372 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 PAGE5Q96GU1 130 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 TRPA1O75762 1119 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 ZNF445P59923 1031 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 LONRF3Q496Y0 759 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 TWF2Q6IBS0 349 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 DDX12PQ92771 950 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 BAG1Q99933 345 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 TBX3O15119 743 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 PIK3CAP42336 1068 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 MXRA8Q9BRK3 442 aa15.45■□□□□ 0.06
SMARCA4-204ENST00000444061 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 STAT1P42224 750 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 TNNC1P63316 161 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 ATP2C1P98194 919 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 NOGQ13253 232 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 ASCC2Q9H1I8 757 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 RBSNQ9H1K0 784 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 HESX1Q9UBX0 185 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 ERCC5P28715 1186 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 XKR3Q5GH77 459 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 IPO4Q8TEX9 1081 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 MSTO1Q9BUK6 570 aa15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 RPF1Q9H9Y2 349 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 PRDM5Q9NQX1 630 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-204ENST00000444061 ST7Q9NRC1 585 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms