RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 UBE3AQ05086 875 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 PDE12Q6L8Q7 609 aaKnown RBP8.82□□□□□ -1
SSXP3-201ENST00000442971 G2E3Q7L622 706 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 ATG9AQ7Z3C6 839 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 RSAD2Q8WXG1 361 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 DNAAF4Q8WXU2 420 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 SHDQ96IW2 340 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 GPR20Q99678 358 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 AAASQ9NRG9 546 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 PPP1R9AQ9ULJ8 1098 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 RAXQ9Y2V3 346 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.82□□□□□ -1
SSXP3-201ENST00000442971 DDX49Q9Y6V7 483 aaKnown RBP8.82□□□□□ -1
SSXP3-201ENST00000442971 NBPF19A0A087WUL8 3843 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 FRMPD2Q68DX3 1309 aaPredicted RBP8.82□□□□□ -1
SSXP3-201ENST00000442971 MYH7BA7E2Y1 1941 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 F5H6K3 240 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 HSPA5P11021 654 aaKnown RBP8.81□□□□□ -1
SSXP3-201ENST00000442971 RARS2Q5T160 578 aaKnown RBP8.81□□□□□ -1
SSXP3-201ENST00000442971 RNF43Q68DV7 783 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 SLC44A3Q8N4M1 653 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 NSUN4Q96CB9 384 aaKnown RBP8.81□□□□□ -1
SSXP3-201ENST00000442971 FOCADQ5VW36 1801 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 POLQO75417 2590 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 COL6A6A6NMZ7 2263 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 SDK1Q7Z5N4 2213 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 RAD50Q92878 1312 aa8.81□□□□□ -1
SSXP3-201ENST00000442971 KANSL1LA0AUZ9 987 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 A6NJR5 290 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 CAPN9O14815 690 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 FSCN2O14926 492 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 MAFO75444 373 aaPredicted RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 DGKIO75912 1065 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 CFHR1Q03591 330 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 AFG1LQ8WV93 481 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 KLHL5Q96PQ7 755 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 NOL10Q9BSC4 688 aaKnown RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 WDR11Q9BZH6 1224 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 CCDC86Q9H6F5 360 aaKnown RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 VCPKMTQ9H867 229 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 VTA1Q9NP79 307 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 GTF2IRD1Q9UHL9 959 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 SERPINB13Q9UIV8 391 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 MTF2Q9Y483 593 aaPredicted RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 PDS5AQ29RF7 1337 aaKnown RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 FAM170BA6NMN3 283 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 GRM8O00222 908 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 GP1BBP13224 206 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 TDGF1P13385 188 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 RASGRF1Q13972 1273 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 UBXN2BQ14CS0 331 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 PTPN14Q15678 1187 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 PLPP4Q5VZY2 271 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 KANK3Q6NY19 840 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 C12orf76Q8N812 135 aaPredicted RBP8.8□□□□□ -1
SSXP3-201ENST00000442971 OSBPL7Q9BZF2 842 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 OSBPL6Q9BZF3 934 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 FBXO40Q9UH90 709 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 HCFC2Q9Y5Z7 792 aa8.8□□□□□ -1
SSXP3-201ENST00000442971 FAM205CA6NFA0 338 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 HRO43593 1189 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 CSRP1P21291 193 aaKnown RBP8.79□□□□□ -1
SSXP3-201ENST00000442971 THPOP40225 353 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 CCDC149Q6ZUS6 474 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 CMTR2Q8IYT2 770 aaKnown RBP8.79□□□□□ -1
SSXP3-201ENST00000442971 CPXCR1Q8N123 301 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 FAM160A2Q8N612 972 aaPredicted RBP8.79□□□□□ -1
SSXP3-201ENST00000442971 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 C8orf58Q8NAV2 365 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 KLHDC4Q8TBB5 520 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 APBB2Q92870 758 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 STK31Q9BXU1 1019 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 EHD4Q9H223 541 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 ARRDC1-AS1Q9H2J1 176 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 AATFQ9NY61 560 aaKnown RBP eCLIP8.79□□□□□ -1
SSXP3-201ENST00000442971 HDAC6Q9UBN7 1215 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 TMX2Q9Y320 296 aa8.79□□□□□ -1
SSXP3-201ENST00000442971 CACNA1FO60840 1977 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 SETD2Q9BYW2 2564 aaPredicted RBP8.78□□□□□ -1
SSXP3-201ENST00000442971 MYH1P12882 1939 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 HIDE1A8MVS5 230 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 MPHOSPH10O00566 681 aaKnown RBP8.78□□□□□ -1
SSXP3-201ENST00000442971 AXIN1O15169 862 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 BAG3O95817 575 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 SHMT1P34896 483 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 DAB2IPQ5VWQ8 1189 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 C7orf31Q8N865 590 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 CHST13Q8NET6 341 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 KAZALD1Q96I82 304 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 DDX23Q9BUQ8 820 aaKnown RBP8.78□□□□□ -1
SSXP3-201ENST00000442971 SLC2A4RGQ9NR83 387 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 PAXBP1Q9Y5B6 917 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 STK24Q9Y6E0 443 aa8.78□□□□□ -1
SSXP3-201ENST00000442971 TTC3P53804 2025 aa8.77□□□□□ -1.01
SSXP3-201ENST00000442971 C4orf47A7E2U8 309 aa8.77□□□□□ -1.01
SSXP3-201ENST00000442971 ATP2A1O14983 1001 aa8.77□□□□□ -1.01
SSXP3-201ENST00000442971 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
SSXP3-201ENST00000442971 CSRP3P50461 194 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms