RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
HSPG2-206ENST00000439717 ZNF746Q6NUN9 644 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-206ENST00000439717 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 SLC5A5Q92911 643 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 SNX21Q969T3 373 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-206ENST00000439717 RIT2Q99578 217 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 FOXP1Q9H334 677 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-206ENST00000439717 DDX25Q9UHL0 483 aaKnown RBP13.39□□□□□ -0.27
HSPG2-206ENST00000439717 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 TCEAL9Q9UHQ7 104 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 TBX21Q9UL17 535 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 TELO2Q9Y4R8 837 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 CCNT1O60563 726 aaKnown RBP13.38□□□□□ -0.27
HSPG2-206ENST00000439717 LGR5O75473 907 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 UTP14CQ5TAP6 766 aaKnown RBP13.38□□□□□ -0.27
HSPG2-206ENST00000439717 SH3RF1Q7Z6J0 888 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-206ENST00000439717 LBHD1Q9BQE6 289 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-206ENST00000439717 TRPV6Q9H1D0 765 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 SMARCAD1Q9H4L7 1026 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 ERAP1Q9NZ08 941 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
HSPG2-206ENST00000439717 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-206ENST00000439717 TBX3O15119 743 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 GAS7O60861 476 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 CCNE2O96020 404 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 TIMP1P01033 207 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 RAG1P15918 1043 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 SLC26A2P50443 739 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
HSPG2-206ENST00000439717 LRCH2Q5VUJ6 765 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 ABHD15Q6UXT9 468 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 GLG1Q92896 1179 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
HSPG2-206ENST00000439717 INTS4Q96HW7 963 aaKnown RBP13.37□□□□□ -0.27
HSPG2-206ENST00000439717 FAM20AQ96MK3 541 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 TEKT3Q9BXF9 490 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
HSPG2-206ENST00000439717 DOCK5Q9H7D0 1870 aa13.37□□□□□ -0.27
HSPG2-206ENST00000439717 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
HSPG2-206ENST00000439717 SLC37A4O43826 429 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 GNAT1P11488 350 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 U2AF2P26368 475 aaKnown RBP eCLIP13.36□□□□□ -0.27
HSPG2-206ENST00000439717 HOXC8P31273 242 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 BMP8BP34820 402 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-206ENST00000439717 STAT5BP51692 787 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 PTGISQ16647 500 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-206ENST00000439717 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 NOSTRINQ8IVI9 506 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 AFAP1L1Q8TED9 768 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 PCYT2Q99447 389 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 GDF15Q99988 308 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 NOD1Q9Y239 953 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 PCDHA10Q9Y5I2 948 aa13.36□□□□□ -0.27
HSPG2-206ENST00000439717 C17orf102A2RUQ5 167 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 WDR64B1ANS9 1081 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 H3BQV1 296 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 PSMD10O75832 226 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 PSAPP07602 524 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 SFNP31947 248 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 TRAPPC10P48553 1259 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 JAK3P52333 1124 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-206ENST00000439717 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 MFSD5Q6N075 450 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 RDM1Q8NG50 284 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 PPP1R13LQ8WUF5 828 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 BADQ92934 168 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 UIMC1Q96RL1 719 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 NOC4LQ9BVI4 516 aaKnown RBP13.35□□□□□ -0.27
HSPG2-206ENST00000439717 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 NRCAMQ92823 1304 aa13.35□□□□□ -0.27
HSPG2-206ENST00000439717 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 BACH1O14867 736 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
HSPG2-206ENST00000439717 CYP2C9P11712 490 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 PDCP20941 246 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 ITGB8P26012 769 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 MARK3P27448 753 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-206ENST00000439717 PTK7Q13308 1070 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 BFSP2Q13515 415 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 LARP1BQ659C4 914 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms