RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
HMGB1P32-201ENST00000425971 CDK12Q9NYV4 1490 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 ATP2A2P16615 1042 aaKnown RBP8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 SPINK2P20155 84 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 IL2P60568 153 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 TMPRSS15P98073 1019 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 MTMR1Q13613 665 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 ARHGAP44Q17R89 818 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 CEP128Q6ZU80 1094 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 VSIG10LQ86VR7 867 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 RIOX2Q8IUF8 465 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 KCNJ15Q99712 375 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 PUS7LQ9H0K6 701 aaKnown RBP8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 EPB41L1Q9H4G0 881 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 SMURF1Q9HCE7 757 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 CATSPERZQ9NTU4 200 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 G3BP2Q9UN86 482 aaKnown RBP8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 RWDD3Q9Y3V2 267 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
HMGB1P32-201ENST00000425971 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.04
HMGB1P32-201ENST00000425971 PTPDC1A2A3K4 754 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 MED26O95402 600 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 AMY2AP04746 511 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 PDE6AP16499 860 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 AMY2BP19961 511 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 RTP1P59025 263 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 SART3Q15020 963 aaKnown RBP8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 CRY1Q16526 586 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 OTOP3Q7RTS5 596 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 CHTF18Q8WVB6 975 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 JDP2Q8WYK2 163 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 THG1LQ9NWX6 298 aaKnown RBP8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 IMPACTQ9P2X3 320 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 FBLN5Q9UBX5 448 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 RGS12O14924 1447 aa8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 NPHP4O75161 1426 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P32-201ENST00000425971 CDK13Q14004 1512 aaKnown RBP8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 TCRBV5S4A2TA0A5A2 114 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 PLEKHD1A6NEE1 506 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 NOTOA8MTQ0 251 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 C22orf46C9J442 243 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 NRDCO43847 1150 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 GNAT1P11488 350 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 ITGB7P26010 798 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 CD97P48960 835 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 JAM2P57087 298 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 CHRNEQ04844 493 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 GPR19Q15760 415 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 ZNF772Q68DY9 489 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 HHIPL2Q6UWX4 724 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 C2orf69Q8N8R5 385 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 TRIM8Q9BZR9 551 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 SP110Q9HB58 689 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 EMC7Q9NPA0 242 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 SPTLC3Q9NUV7 552 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 CCDC39Q9UFE4 941 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 ACSL6Q9UKU0 697 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 LRP5O75197 1615 aa8.51□□□□□ -1.05
HMGB1P32-201ENST00000425971 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 ALDH1L1O75891 902 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 EFEMP2O95967 443 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 FUCA1P04066 466 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 MSL3P1P0C860 447 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 OCRLQ01968 901 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 MVKQ03426 396 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 SPIRE1Q08AE8 756 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 MROH9Q5TGP6 573 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 GALNT18Q6P9A2 607 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 LZTR1Q8N653 840 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 PDZD8Q8NEN9 1154 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 COG1Q8WTW3 980 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 BOCQ9BWV1 1114 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 COA3Q9Y2R0 106 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 MLH3Q9UHC1 1453 aa8.5□□□□□ -1.05
HMGB1P32-201ENST00000425971 SLC12A8A0AV02 714 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 ZBTB48P10074 688 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 COL6A2P12110 1019 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 FUT4P22083 530 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 NR0B2Q15466 257 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 ATP13A4Q4VNC1 1196 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 FSTL4Q6MZW2 842 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 SLC23A3Q6PIS1 610 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 OSTM1Q86WC4 334 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 EFHBQ8N7U6 833 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 SH3RF2Q8TEC5 729 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 PRDM7Q9NQW5 492 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 PDLIM7Q9NR12 457 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 OXSMQ9NWU1 459 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 CHPF2Q9P2E5 772 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 MED14O60244 1454 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 ITSN2Q9NZM3 1697 aa8.49□□□□□ -1.05
HMGB1P32-201ENST00000425971 ABCC1P33527 1531 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms