RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 FOXR2Q6PJQ5 311 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 GUF1Q8N442 669 aaKnown RBP16.93■□□□□ 0.3
ACTB-204ENST00000425660 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 INTS13Q9NVM9 706 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 A0A1B0GTH6 734 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 SLC25A27O95847 323 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 SSBP05455 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
ACTB-204ENST00000425660 IDEP14735 1019 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 OSBPP22059 807 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 CCNE1P24864 410 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 COASYQ13057 564 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 CTTNQ14247 550 aaKnown RBP16.93■□□□□ 0.3
ACTB-204ENST00000425660 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 CTAGE1Q96RT6 745 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 KCNF1Q9H3M0 494 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 PANK4Q9NVE7 773 aa16.93■□□□□ 0.3
ACTB-204ENST00000425660 BICDL2A1A5D9 508 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
ACTB-204ENST00000425660 RGS20O76081 388 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 PTGS1P23219 599 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 COPB2P35606 906 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 SPAG1Q07617 926 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 HSP90AA4PQ58FG1 418 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 CCDC65Q8IXS2 484 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 P2RX5Q93086 422 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 HPS3Q969F9 1004 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 MOV10L1Q9BXT6 1211 aaKnown RBP16.92■□□□□ 0.3
ACTB-204ENST00000425660 BHMT2Q9H2M3 363 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 ZNF408Q9H9D4 720 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 SLC39A2Q9NP94 309 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 WRAP73Q9P2S5 460 aaPredicted RBP16.92■□□□□ 0.3
ACTB-204ENST00000425660 RBPJLQ9UBG7 517 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
ACTB-204ENST00000425660 ASTN1O14525 1302 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 TRIM49BA6NDI0 452 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 PEX10O60683 326 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 ATP9AO75110 1047 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 GIT2Q14161 759 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 TPD52L1Q16890 204 aaPredicted RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 TPH2Q8IWU9 490 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 CDHR1Q96JP9 859 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 LXNQ9BS40 222 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 THAP9Q9H5L6 903 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 GBA2Q9HCG7 927 aaPredicted RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 TXNRD2Q9NNW7 524 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 KCND2Q9NZV8 630 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 LIMA1Q9UHB6 759 aaKnown RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 SLC45A1Q9Y2W3 748 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 LCTP09848 1927 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 LYPLA2O95372 231 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 GSDMDP57764 484 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 KRT76Q01546 638 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 NR1I3Q14994 352 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 FAM26FQ5R3K3 315 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 IRF2BP1Q8IU81 584 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 VSTM4Q8IW00 320 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 ZNF830Q96NB3 372 aaPredicted RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 SENP7Q9BQF6 1050 aa16.91■□□□□ 0.3
ACTB-204ENST00000425660 ADD3Q9UEY8 706 aaKnown RBP16.91■□□□□ 0.3
ACTB-204ENST00000425660 ERCC3P19447 782 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 EDNRBP24530 442 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 SFNP31947 248 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 TCP11X2Q5H9J9 407 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 RINT1Q6NUQ1 792 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 RDM1Q8NG50 284 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 GTF3C2Q8WUA4 911 aaPredicted RBP16.9■□□□□ 0.3
ACTB-204ENST00000425660 REEP2Q9BRK0 252 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 ZSWIM4Q9H7M6 989 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
ACTB-204ENST00000425660 PNMA3Q9UL41 463 aa16.9■□□□□ 0.3
ACTB-204ENST00000425660 NPHP3-ACAD11A0A0J9YXS1 232 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 DDX39AO00148 427 aaKnown RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 ZNF500O60304 480 aaPredicted RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 COBLO75128 1261 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 CETPP11597 493 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 KCNA2P16389 499 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 JAK3P52333 1124 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 GTF2A2P52657 109 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 GNPTABQ3T906 1256 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 ZNF746Q6NUN9 644 aaPredicted RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 FILIP1Q7Z7B0 1213 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 NCAPG2Q86XI2 1143 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 FAM133AQ8N9E0 248 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 TRIM47Q96LD4 638 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 RUSC1Q9BVN2 902 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms