RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TPCN1Q9ULQ1 816 aa12.76□□□□□ -0.37
RFFL-204ENST00000414419 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
RFFL-204ENST00000414419 GSTTP1A0A1W2PQM5 241 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 PFKFB2O60825 505 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 NFASCO94856 1347 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 SEC24BO95487 1268 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 CYP3A4P08684 503 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 CKBP12277 381 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 ZNF200P98182 395 aaPredicted RBP12.75□□□□□ -0.37
RFFL-204ENST00000414419 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
RFFL-204ENST00000414419 SCRN1Q12765 414 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 LRRC8DQ7L1W4 858 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 NIPA1Q7RTP0 329 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 FAM177A1Q8N128 213 aaPredicted RBP12.75□□□□□ -0.37
RFFL-204ENST00000414419 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
RFFL-204ENST00000414419 FAM161BQ96MY7 647 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 RNPEPQ9H4A4 650 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
RFFL-204ENST00000414419 TCEAL9Q9UHQ7 104 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 SLC4A7Q9Y6M7 1214 aa12.75□□□□□ -0.37
RFFL-204ENST00000414419 GBF1Q92538 1859 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 FAM86B1E9PN63 330 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 FAM86B2P0C5J1 330 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 THPOP40225 353 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 WASF1Q92558 559 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 DHX38Q92620 1227 aaKnown RBP12.74□□□□□ -0.37
RFFL-204ENST00000414419 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 ZNF577Q9BSK1 485 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 MTMR10Q9NXD2 777 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 CXXC1Q9P0U4 656 aaPredicted RBP12.74□□□□□ -0.37
RFFL-204ENST00000414419 PCDHA4Q9UN74 947 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 TELO2Q9Y4R8 837 aa12.74□□□□□ -0.37
RFFL-204ENST00000414419 NRCAMQ92823 1304 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
RFFL-204ENST00000414419 IPO5O00410 1097 aaKnown RBP12.73□□□□□ -0.37
RFFL-204ENST00000414419 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 TREHO43280 583 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 MARK3P27448 753 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 USP11P51784 963 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 ACTR2P61160 394 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 RBL2Q08999 1139 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 PRR16Q569H4 304 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 SERINC5Q86VE9 423 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 BLIDQ8IZY5 108 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 IL17RAQ96F46 866 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 TBC1D22BQ9NU19 505 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 MSRAQ9UJ68 235 aa12.73□□□□□ -0.37
RFFL-204ENST00000414419 WDR81Q562E7 1941 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 STK36Q9NRP7 1315 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 TMEM265A0A087WTH1 108 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 GRXCR1A8MXD5 290 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 RSPH10B2B2RC85 870 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 BACH1O14867 736 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 RSPH10BP0C881 870 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 DNAJB2P25686 324 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 KCNJ6P48051 423 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 STAT5BP51692 787 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 PPFIA1Q13136 1202 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 ITGB3BPQ13352 177 aaPredicted RBP12.72□□□□□ -0.37
RFFL-204ENST00000414419 HIC1Q14526 733 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 RAB30Q15771 203 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 ZNF618Q5T7W0 954 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 LMBR1Q8WVP7 490 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 CRYGNQ8WXF5 182 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 TIFAQ96CG3 184 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 AIFM3Q96NN9 605 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 SEMA6BQ9H3T3 888 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
RFFL-204ENST00000414419 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
RFFL-204ENST00000414419 IGLV3-22A0A075B6J6 115 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 RRN3P2A6NIE6 340 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 CAND2O75155 1236 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 LGR5O75473 907 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 BAIAP3O94812 1187 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.37
RFFL-204ENST00000414419 HOXC8P31273 242 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 CIITAP33076 1130 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.37
RFFL-204ENST00000414419 GRIK4Q16099 956 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 ME3Q16798 604 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
RFFL-204ENST00000414419 C8orf34Q49A92 452 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 MIS18BP1Q6P0N0 1132 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 CNKSR3Q6P9H4 555 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 PLPPR4Q7Z2D5 763 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 DAGLBQ8NCG7 672 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 WNT8BQ93098 351 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 GTF3C6Q969F1 213 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 UIMC1Q96RL1 719 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms